Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.9e-100 368.6 193 100.0
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.5e-35 153.7 95 88.4
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 8.3e-31 137.9 119 68.1
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.1e-30 137.5 83 85.5
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.2e-30 136.0 83 85.5
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 4.1e-30 135.6 81 86.4
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 7.0e-30 134.8 80 87.5
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 9.2e-30 134.4 100 76.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 2.0e-29 133.3 82 82.9
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.7e-29 132.9 79 88.6
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 2.7e-29 132.9 121 66.9
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.7e-29 132.9 83 83.1
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 3.5e-29 132.5 84 83.3
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.6e-29 132.1 90 81.1
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 5.9e-29 131.7 82 85.4
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 7.8e-29 131.3 82 82.9
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 7.8e-29 131.3 140 58.6
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 7.8e-29 131.3 82 81.7
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.0e-28 131.0 79 84.8
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.0e-28 131.0 78 85.9
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.3e-28 130.6 88 79.5
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.3e-28 130.6 84 82.1
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.7e-28 130.2 120 65.0
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.7e-28 130.2 79 84.8
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 2.3e-28 129.8 134 61.9
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.3e-28 129.8 140 57.9
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 5.0e-28 128.6 132 60.6
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 5.0e-28 128.6 80 82.5
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 5.0e-28 128.6 80 86.2
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 5.0e-28 128.6 112 67.0
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 6.6e-28 128.3 93 77.4
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 6.6e-28 128.3 78 85.9
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 6.6e-28 128.3 78 85.9
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 6.6e-28 128.3 127 63.8
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.6e-28 127.9 95 75.8
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 8.6e-28 127.9 84 79.8
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.1e-27 127.5 95 75.8
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 1.5e-27 127.1 126 62.7
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 1.9e-27 126.7 84 81.0
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.9e-27 126.7 78 83.3
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.9e-27 126.7 119 63.9
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.9e-27 126.7 95 75.8
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 2.5e-27 126.3 90 77.8
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 3.3e-27 125.9 123 63.4
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 3.3e-27 125.9 77 85.7
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 4.3e-27 125.6 78 83.3
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 4.3e-27 125.6 137 62.0
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 4.3e-27 125.6 78 84.6
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 4.3e-27 125.6 78 83.3
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 7.3e-27 124.8 78 82.1
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 7.3e-27 124.8 78 82.1
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 7.3e-27 124.8 123 61.0
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 7.3e-27 124.8 143 57.3
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 7.3e-27 124.8 120 65.0
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 7.3e-27 124.8 90 75.6
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 9.5e-27 124.4 124 64.5
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 9.5e-27 124.4 78 83.3
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 9.5e-27 124.4 87 73.6
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.2e-26 124.0 98 71.4
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.2e-26 124.0 78 82.1
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.6e-26 123.6 78 80.8
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.6e-26 123.6 82 81.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 2.1e-26 123.2 77 83.1
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 2.1e-26 123.2 117 62.4
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.1e-26 123.2 77 83.1
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.1e-26 123.2 126 61.9
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.8e-26 122.9 80 78.8
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 3.6e-26 122.5 78 80.8
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 3.6e-26 122.5 78 80.8
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 3.6e-26 122.5 78 80.8
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 3.6e-26 122.5 78 80.8
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 3.6e-26 122.5 78 80.8
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 4.7e-26 122.1 77 84.4
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 4.7e-26 122.1 76 84.2
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 4.7e-26 122.1 76 84.2
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 6.1e-26 121.7 82 78.0
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 6.1e-26 121.7 78 80.8
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 6.1e-26 121.7 82 79.3
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.0e-25 120.9 76 82.9
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.0e-25 120.9 82 78.0
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 1.4e-25 120.6 141 56.7
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.8e-25 120.2 74 83.8
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.8e-25 120.2 91 73.6
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 2.3e-25 119.8 126 59.5
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.3e-25 119.8 95 69.5
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 3.1e-25 119.4 89 75.3
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 3.1e-25 119.4 139 55.4
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 3.1e-25 119.4 77 81.8
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 3.1e-25 119.4 77 81.8
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 3.1e-25 119.4 77 81.8
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 3.1e-25 119.4 101 69.3
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 6.8e-25 118.2 141 56.0
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 6.8e-25 118.2 141 56.0
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.4e-24 115.9 78 78.2
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.4e-24 115.9 78 78.2
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.4e-24 115.9 78 78.2
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.4e-24 115.9 78 78.2
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 3.4e-24 115.9 96 71.9
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 3.4e-24 115.9 78 78.2
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 7.5e-24 114.8 121 56.2
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 9.8e-24 114.4 85 74.1
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.1e-22 110.9 77 77.9
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 7.0e-22 108.2 75 76.0
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 7.0e-22 108.2 67 83.6
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 7.0e-22 108.2 67 83.6
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.3e-20 104.0 96 60.4
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.5e-19 100.5 78 69.2
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 3.3e-19 99.4 70 75.7
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 7.3e-19 98.2 102 62.7
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.2e-18 97.4 83 68.7
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 4.7e-18 95.5 100 57.0
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 6.2e-18 95.1 148 43.9
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 6.8e-17 91.7 79 59.5
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 2.6e-16 89.7 98 59.2
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 3.4e-16 89.4 60 83.3
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 4.4e-16 89.0 56 83.9
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.4e-14 84.0 126 47.6
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.1e-13 80.1 62 67.7
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 2.7e-13 79.7 58 77.6
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 3.4e-08 62.8 73 50.7
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 5.8e-08 62.0 49 69.4
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 2.2e-07 60.1 63 49.2
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 6.4e-07 58.5 107 43.9
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 6.4e-07 58.5 48 75.0
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 8.4e-07 58.2 35 88.6


User provided reference genes

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