Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023272 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.0e-84 315.1 155 100.0
CSS0027970 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.6e-51 204.1 153 69.9
CSS0043593 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.6e-48 196.4 153 68.0
Dinv14651 Davidia involucrata HOM05D019978 ORTHO05D018230 1.4e-44 183.3 143 66.4
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 1.7e-42 176.4 100 83.0
CSS0016316 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.3e-39 166.0 153 61.4
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 5.1e-39 164.9 137 65.7
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.8e-34 148.7 154 48.1
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.9e-32 141.0 154 47.4
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-30 135.2 155 45.2
Hma1.2p1_1125F.1_g259630 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.4e-30 134.4 155 44.5
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-29 133.7 154 45.5
Lsat_1_v5_gn_5_118361 Lactuca sativa HOM05D000023 ORTHO05D000014 1.3e-29 133.7 154 43.5
Hma1.2p1_0153F.1_g067820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.7e-29 132.1 155 44.5
HanXRQChr05g0139411 Helianthus annuus HOM05D000023 ORTHO05D000014 3.8e-26 122.1 154 40.9
Hma1.2p1_0169F.1_g074660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.8e-26 122.1 142 45.1
AUR62042194 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.5e-26 121.3 154 40.9
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-26 121.3 138 44.9
ECA238G0901 Erigeron canadensis HOM05D000023 ORTHO05D000014 4.2e-25 118.6 154 38.3
AUR62012060 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.1e-25 117.9 154 40.3
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 3.5e-24 115.5 137 41.6
Hma1.2p1_0084F.1_g042930 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.0e-24 114.8 93 57.0
Hund22389 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.9e-24 114.4 155 40.0
EL10Ac2g03711 Beta vulgaris HOM05D000023 ORTHO05D000014 1.1e-22 110.5 154 37.0
Ah.07g197140 Amaranthus hybridus HOM05D000023 ORTHO05D000014 2.8e-21 105.9 93 48.4
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.0e-20 100.9 154 36.4
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 1.5e-19 100.1 169 34.9
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.5e-19 100.1 154 37.0
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.3e-18 97.1 154 35.1
vmacro21168 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.3e-18 97.1 100 42.0
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-18 96.7 100 42.0
Rhsim12G0068300 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.8e-18 95.5 100 40.0
RhsimUnG0210600 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.8e-18 95.5 102 40.2
vmacro21165 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.8e-18 95.5 102 40.2
Rhsim12G0068400 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.0e-18 95.1 100 40.0
vmacro01190 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.2e-17 92.4 102 40.2
vmacro22609 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.2e-17 92.4 102 40.2
Hma1.2p1_1264F.1_g271330 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.5e-17 91.7 100 39.0
Hma1.2p1_0400F.1_g144380 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.1e-16 89.7 100 40.0
Ah.10g026540 Amaranthus hybridus HOM05D057872 ORTHO05D000014 2.7e-16 89.4 135 31.9
COL.COLO4_27211 Corchorus olitorius HOM05D000023 ORTHO05D000014 4.6e-16 88.6 100 47.0
Hma1.2p1_0232F.1_g097790 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.0e-15 87.4 100 37.0
COL.COLO4_06621 Corchorus olitorius HOM05D023965 ORTHO05D000014 2.3e-15 86.3 58 67.2
PSO500G0158 Papaver somniferum HOM05D000023 ORTHO05D000014 3.9e-15 85.5 100 38.0
PSO170G2584 Papaver somniferum HOM05D000023 ORTHO05D000014 5.1e-15 85.1 100 38.0
PSO421G0727 Papaver somniferum HOM05D000023 ORTHO05D000014 5.1e-15 85.1 100 39.0
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.3e-14 82.0 66 57.6
Hma1.2p1_2537F.1_g324110 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.4e-14 81.3 66 56.1
PSO063G5350 Papaver somniferum HOM05D000023 ORTHO05D000014 7.4e-14 81.3 100 37.0
RhsimUnG0179400 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.4e-14 81.3 85 40.0
RhsimUnG0179600 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.4e-14 81.3 85 40.0
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.7e-14 80.9 84 41.7
PSO675G4268 Papaver somniferum HOM05D000023 ORTHO05D000014 9.7e-14 80.9 101 36.6
PSO675G3696 Papaver somniferum HOM05D000023 ORTHO05D000014 1.3e-13 80.5 100 36.0
vmacro21303 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.3e-13 80.5 100 38.0
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.6e-13 80.1 81 43.2
RcHm_v2.0_Chr5g0011621 Rosa chinensis HOM05D013926 ORTHO05D020985 1.1e-12 77.4 73 49.3
Rhsim04G0118200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.8e-12 76.6 95 37.9
Actinidia02644 Actinidia chinensis HOM05D000023 ORTHO05D000014 9.0e-12 74.3 47 76.6
Hma1.2p1_0006F.1_g004740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-11 73.6 88 35.2
HPP92_024951 Vanilla planifolia HOM05D000023 ORTHO05D000014 7.7e-11 71.2 156 27.6
Hma1.2p1_0139F.1_g063210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-10 70.1 98 40.8
HPP92_026521 Vanilla planifolia HOM05D000023 ORTHO05D000014 1.7e-10 70.1 98 31.6
AUR62042294 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.9e-10 69.3 106 34.9
ECA240G1446 Erigeron canadensis HOM05D001392 ORTHO05D003370 8.5e-10 67.8 85 37.6
Hma1.2p1_1081F.1_g255100 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.9e-09 66.6 44 75.0
vmacro15507 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.5e-09 65.1 73 42.5
Rhsim01G0022100 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.6e-08 63.5 66 37.9
SEGI_21421 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.9e-07 58.9 89 32.6
Lsat_1_v5_gn_2_11620 Lactuca sativa HOM05D000023 ORTHO05D000014 6.7e-07 58.2 66 39.4
Hma1.2p1_3849F.1_g337730 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-06 57.0 50 52.0
SEGI_16527 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.0e-06 56.6 89 31.5
Ah.07g197130 Amaranthus hybridus HOM05D000023 ORTHO05D000014 3.3e-06 55.8 93 31.2
Rhsim03G0158500 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.3e-06 55.8 70 35.7
SEGI_10450 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.3e-06 55.8 89 30.3
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.3e-06 55.8 100 27.0
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.3e-06 55.8 100 27.0
EL10Ac1g01552 Beta vulgaris HOM05D000023 ORTHO05D000014 4.3e-06 55.5 61 42.6
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.7e-06 55.1 100 27.0
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 9.7e-06 54.3 102 27.5
SEGI_35103 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.7e-06 54.3 89 30.3


User provided reference genes

Program Settings