Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.5e-35 152.1 66 100.0
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 7.2e-27 123.2 58 93.1
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.2e-24 115.9 58 86.2
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 7.0e-14 80.1 60 56.7
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 1.6e-13 79.0 61 55.7
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 1.7e-12 75.5 66 48.5
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 2.3e-12 75.1 59 52.5
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 2.9e-12 74.7 58 56.9
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 6.6e-12 73.6 56 50.0
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 8.6e-12 73.2 58 50.0
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 2.5e-11 71.6 63 49.2
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 7.3e-11 70.1 59 49.2
QL04p009829 Quercus lobata HOM05D008295 ORTHO05D010471 7.3e-11 70.1 64 45.3
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 2.1e-10 68.6 66 45.5
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 4.7e-10 67.4 58 48.3
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 1.4e-09 65.9 67 49.3
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 1.8e-09 65.5 58 51.7
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 3.1e-09 64.7 58 51.7
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 4.0e-09 64.3 58 50.0
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 4.0e-09 64.3 58 50.0
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 4.0e-09 64.3 58 50.0
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 4.0e-09 64.3 58 50.0
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 4.0e-09 64.3 58 51.7
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 5.2e-09 63.9 58 50.0
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 5.2e-09 63.9 58 50.0
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 6.8e-09 63.5 63 47.6
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 6.8e-09 63.5 60 46.7
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 6.8e-09 63.5 63 47.6
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 1.2e-08 62.8 58 50.0
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 1.2e-08 62.8 58 50.0
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 1.5e-08 62.4 66 48.5
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 1.5e-08 62.4 66 48.5
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 1.5e-08 62.4 58 48.3
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 1.5e-08 62.4 66 48.5
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 1.5e-08 62.4 66 48.5
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 1.5e-08 62.4 66 48.5
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 1.5e-08 62.4 58 48.3
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 1.5e-08 62.4 58 48.3
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 2.0e-08 62.0 66 43.9
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 2.0e-08 62.0 58 48.3
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 2.6e-08 61.6 50 48.0
BraA02t06655Z Brassica rapa HOM05D008295 ORTHO05D010471 5.8e-08 60.5 58 48.3
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 1.3e-07 59.3 58 50.0
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 1.7e-07 58.9 59 49.2
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 1.7e-07 58.9 66 45.5
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 1.7e-07 58.9 66 45.5
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 1.7e-07 58.9 66 45.5
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 1.7e-07 58.9 66 45.5
AL3G37770 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 9.2e-06 53.1 60 43.3


User provided reference genes

Program Settings