Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.8e-94 349.4 190 100.0
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 5.4e-59 231.5 200 65.0
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 1.7e-57 226.5 169 76.3
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 5.1e-57 224.9 182 70.3
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.1e-56 223.8 191 69.6
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.1e-56 223.8 191 69.6
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 3.6e-55 218.8 177 68.4
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 6.9e-54 214.5 195 65.1
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 2.0e-53 213.0 195 63.6
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 2.6e-53 212.6 193 65.8
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 3.4e-53 212.2 187 63.6
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 7.6e-53 211.1 190 63.7
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 6.4e-52 208.0 193 64.8
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 8.4e-52 207.6 192 62.5
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 1.1e-51 207.2 198 63.1
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 1.1e-51 207.2 188 63.3
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.4e-51 206.8 182 62.6
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 1.9e-51 206.5 189 63.5
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.4e-51 206.1 196 60.7
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 3.2e-51 205.7 188 62.8
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 7.1e-51 204.5 194 61.9
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 3.5e-50 202.2 190 64.7
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 6.0e-50 201.4 188 61.7
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.0e-50 201.4 183 61.7
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 3.0e-49 199.1 184 65.8
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 8.7e-49 197.6 192 60.9
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.5e-48 196.8 190 60.5
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 2.5e-48 196.1 188 60.6
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 2.5e-48 196.1 189 60.8
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 2.5e-48 196.1 194 61.9
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 4.3e-48 195.3 178 62.4
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 4.3e-48 195.3 141 72.3
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 5.6e-48 194.9 192 59.9
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 7.3e-48 194.5 190 62.6
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.3e-47 193.7 185 61.1
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.6e-47 193.4 183 60.1
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 2.8e-47 192.6 188 59.0
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 3.6e-47 192.2 169 62.1
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 3.6e-47 192.2 192 61.5
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 3.6e-47 192.2 191 60.7
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 4.8e-47 191.8 182 61.5
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.2e-47 191.4 183 59.6
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 1.4e-46 190.3 191 62.3
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.4e-46 189.5 166 63.3
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 2.4e-46 189.5 175 62.9
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 4.0e-46 188.7 186 62.4
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 4.0e-46 188.7 196 59.7
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 5.3e-46 188.3 169 63.9
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 5.3e-46 188.3 179 62.0
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 5.3e-46 188.3 193 53.4
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 6.9e-46 188.0 189 57.7
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 9.0e-46 187.6 182 57.1
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.2e-45 187.2 169 63.9
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.5e-45 186.8 183 61.2
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 2.0e-45 186.4 169 63.3
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 3.4e-45 185.7 142 67.6
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 4.5e-45 185.3 186 60.2
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 5.8e-45 184.9 171 61.4
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 5.8e-45 184.9 194 58.2
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 9.9e-45 184.1 188 60.1
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 9.9e-45 184.1 168 60.1
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 9.9e-45 184.1 184 58.2
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.3e-44 183.7 160 65.6
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 2.2e-44 183.0 189 57.1
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 4.9e-44 181.8 173 61.8
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 6.4e-44 181.4 195 56.9
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 3.2e-43 179.1 137 67.9
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 3.2e-43 179.1 188 57.4
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 3.2e-43 179.1 158 61.4
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 5.5e-43 178.3 187 58.3
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.7e-42 176.0 187 59.4
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 3.5e-42 175.6 193 57.0
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 7.9e-42 174.5 183 55.7
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 7.9e-42 174.5 183 55.7
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 1.0e-41 174.1 177 56.5
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 1.3e-41 173.7 193 52.8
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.3e-41 172.9 187 57.2
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 5.1e-41 171.8 193 54.4
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.1e-40 170.6 208 53.8
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 2.5e-40 169.5 181 54.7
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 7.4e-40 167.9 181 57.5
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 9.6e-40 167.5 116 72.4
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 9.6e-40 167.5 185 55.7
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.6e-39 166.8 174 56.9
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.8e-39 166.0 194 51.0
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 9.0e-38 161.0 173 56.1
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 9.0e-38 161.0 186 52.7
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 2.6e-37 159.5 192 50.0
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.9e-36 156.0 142 61.3
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 6.5e-36 154.8 153 52.9
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 2.5e-35 152.9 146 61.6
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 7.1e-35 151.4 189 52.9
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 9.3e-35 151.0 109 71.6
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 3.9e-33 145.6 89 78.7
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 5.7e-32 141.7 158 57.6
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 4.8e-31 138.7 191 42.4
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.4e-30 137.1 158 48.1
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 1.7e-28 130.2 135 46.7
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 3.8e-28 129.0 203 44.3
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 2.7e-26 122.9 148 49.3
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 3.0e-25 119.4 137 47.4
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.1e-24 117.5 136 55.9
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.5e-24 117.1 160 45.0
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 6.3e-23 111.7 134 55.2
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 1.1e-16 90.9 79 53.2
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.7e-15 87.0 112 47.3
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 5.3e-14 82.0 108 47.2
Lsat_1_v5_gn_7_115640 Lactuca sativa HOM05D018034 ORTHO05D006583 9.1e-06 54.7 103 45.6


User provided reference genes

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