Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 4.9e-134 481.9 407 100.0
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 5.0e-118 428.7 406 84.0
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 6.1e-116 421.8 404 87.6
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 6.3e-113 411.8 406 81.8
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 4.8e-105 385.6 404 79.7
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 8.2e-105 384.8 405 78.5
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 7.7e-103 378.3 405 81.0
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 1.3e-102 377.5 404 79.5
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 1.3e-102 377.5 404 79.5
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.3e-102 377.5 404 84.2
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 2.9e-102 376.3 405 79.5
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 8.5e-102 374.8 407 80.3
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 8.5e-102 374.8 407 80.3
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.8e-99 367.1 406 81.8
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 2.0e-98 363.6 408 82.1
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 9.7e-98 361.3 407 77.4
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 1.7e-97 360.5 399 76.9
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 1.8e-96 357.1 403 74.4
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 3.5e-95 352.8 405 76.5
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 3.5e-95 352.8 407 78.9
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 3.5e-95 352.8 406 73.6
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 5.9e-95 352.1 407 75.7
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 1.7e-94 350.5 407 77.6
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 2.9e-94 349.7 401 79.6
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 3.8e-94 349.4 407 78.1
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 3.8e-94 349.4 407 77.6
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 6.5e-94 348.6 407 78.9
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 1.1e-93 347.8 406 75.1
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 3.2e-93 346.3 407 78.4
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 4.2e-93 345.9 407 77.1
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 4.2e-93 345.9 404 78.7
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 4.2e-93 345.9 404 76.2
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 5.5e-93 345.5 404 80.4
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 5.5e-93 345.5 405 80.7
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 7.2e-93 345.1 403 71.2
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 7.2e-93 345.1 468 60.9
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 7.2e-93 345.1 403 77.4
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 1.6e-92 344.0 404 80.9
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 2.7e-92 343.2 407 80.3
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 2.7e-92 343.2 404 80.2
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 3.6e-92 342.8 406 73.4
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 3.6e-92 342.8 406 74.9
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 4.7e-92 342.4 407 80.6
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 4.7e-92 342.4 406 73.4
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 4.7e-92 342.4 403 77.2
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 8.0e-92 341.7 404 73.8
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 1.0e-91 341.3 400 78.2
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 1.4e-91 340.9 405 73.3
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 1.8e-91 340.5 407 80.1
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 1.8e-91 340.5 407 73.0
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 2.3e-91 340.1 405 77.5
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 3.0e-91 339.7 405 78.0
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 5.2e-91 339.0 407 73.2
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 6.7e-91 338.6 407 76.4
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 1.5e-90 337.4 407 75.9
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 7.5e-90 335.1 397 76.8
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 1.7e-89 334.0 406 73.2
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 2.8e-89 333.2 535 57.8
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 6.3e-89 332.0 407 75.4
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 2.4e-88 330.1 403 73.4
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 4.1e-88 329.3 404 75.7
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 5.3e-88 328.9 406 72.9
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 9.1e-88 328.2 407 77.1
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.6e-87 327.4 405 76.5
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 3.5e-87 326.2 406 72.4
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 1.3e-86 324.3 406 75.6
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 1.7e-86 323.9 407 77.6
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 1.7e-86 323.9 400 76.2
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 5.0e-86 322.4 414 72.0
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 5.5e-85 318.9 404 74.5
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 1.6e-84 317.4 407 75.4
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 2.1e-84 317.0 406 77.1
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 3.6e-84 316.2 405 72.1
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 5.2e-83 312.4 434 57.1
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 8.8e-83 311.6 402 76.6
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 2.0e-82 310.5 407 71.0
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 2.6e-82 310.1 392 73.0
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 1.8e-80 303.9 400 70.5
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 5.4e-80 302.4 401 73.6
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 1.7e-78 297.4 407 70.3
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 5.7e-74 282.3 416 63.5
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 9.8e-74 281.6 407 70.3
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 3.2e-72 276.6 405 71.6
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 9.2e-72 275.0 397 73.0
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 1.3e-70 271.2 398 63.3
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 2.5e-69 266.9 398 74.1
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 9.5e-69 265.0 409 69.2
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 2.1e-68 263.8 403 73.0
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 1.0e-67 261.5 404 70.3
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 1.4e-67 261.2 403 72.2
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 3.4e-66 256.5 401 74.3
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 4.4e-66 256.1 400 73.8
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 6.4e-65 252.3 404 73.0
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 7.0e-64 248.8 405 71.6
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 2.6e-58 230.3 421 58.0
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 5.4e-56 222.6 406 71.9
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 6.8e-51 205.7 185 67.6
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 5.8e-50 202.6 403 68.7
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 9.9e-50 201.8 393 67.7
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 9.2e-48 195.3 399 64.9
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 1.1e-43 181.8 180 56.1
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 1.2e-42 178.3 187 56.7
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 1.7e-41 174.5 112 76.8
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 3.5e-39 166.8 108 74.1
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 3.5e-39 166.8 108 74.1
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 1.3e-38 164.9 400 63.8
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.6e-36 157.9 183 50.8
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 9.0e-35 152.1 96 78.1
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 3.4e-34 150.2 393 44.5
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 5.8e-34 149.4 108 66.7
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 2.7e-31 140.6 392 61.0
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 7.8e-31 139.0 92 75.0
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 1.5e-21 108.2 76 63.2
Pp3c10_8230 Physcomitrium patens HOM05D006667 ORTHO05D008387 1.3e-06 58.5 60 51.7


User provided reference genes

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