Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.2e-253 878.2 557 100.0
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.6e-167 593.6 559 69.1
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 8.7e-166 587.8 551 75.0
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.0e-158 564.3 556 73.0
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 1.5e-141 507.3 548 69.2
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 5.9e-138 495.4 559 66.4
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 8.0e-135 485.0 562 58.5
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 2.3e-134 483.4 563 65.2
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 6.3e-132 475.3 565 65.5
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 7.2e-128 461.8 560 59.1
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 3.0e-126 456.4 576 57.5
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 7.5e-125 451.8 560 63.0
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 4.9e-124 449.1 566 57.6
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 1.1e-123 448.0 559 63.0
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 5.0e-121 439.1 551 63.9
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 1.1e-120 438.0 556 56.3
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 5.6e-120 435.6 465 71.4
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.0e-118 431.4 505 61.4
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 2.7e-114 416.8 499 63.1
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 4.6e-114 416.0 498 60.2
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.3e-113 414.5 565 59.8
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.3e-113 414.5 559 60.6
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 6.6e-113 412.1 527 58.6
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 6.6e-113 412.1 531 61.8
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 8.6e-113 411.8 526 58.2
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.6e-111 407.5 520 57.7
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 6.2e-111 405.6 560 60.7
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.8e-110 404.1 674 49.7
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 2.3e-110 403.7 550 60.7
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 6.8e-110 402.1 499 63.1
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 8.9e-110 401.7 559 59.9
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 7.5e-109 398.7 574 53.7
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 2.9e-108 396.7 594 57.1
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 7.0e-107 392.1 503 58.3
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 3.5e-106 389.8 532 54.9
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 2.3e-105 387.1 519 53.9
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 3.0e-105 386.7 549 51.5
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 3.0e-105 386.7 374 75.9
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 8.6e-105 385.2 557 51.7
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 1.1e-104 384.8 562 57.7
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 1.5e-104 384.4 522 52.7
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.9e-104 384.0 560 57.5
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 7.3e-104 382.1 559 53.3
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 2.1e-103 380.6 562 57.3
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 4.7e-103 379.4 426 61.3
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.1e-102 378.3 565 57.9
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.1e-102 378.3 479 63.9
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 1.8e-102 377.5 522 54.8
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 2.3e-102 377.1 561 57.2
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 8.9e-102 375.2 554 57.6
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.2e-101 374.8 519 55.5
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 1.7e-100 370.9 517 55.1
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.9e-100 370.2 565 57.2
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 2.9e-100 370.2 553 49.7
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.2e-98 364.8 525 51.0
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.0e-97 361.7 523 51.6
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 2.5e-96 357.1 565 41.9
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 7.3e-96 355.5 517 58.4
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 7.3e-96 355.5 559 57.2
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.8e-95 353.6 545 51.4
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 8.1e-95 352.1 475 56.0
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.1e-94 351.7 458 53.9
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 3.8e-92 343.2 390 67.4
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.5e-88 331.3 506 53.6
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 2.5e-88 330.5 298 61.1
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 8.9e-86 322.0 471 53.3
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 3.4e-85 320.1 490 52.9
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 3.8e-84 316.6 502 51.2
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 1.1e-80 305.1 486 41.2
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 7.6e-77 292.4 342 62.9
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 1.7e-76 291.2 369 61.5
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 2.4e-75 287.3 521 38.0
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.9e-72 277.7 559 44.5
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 2.6e-69 267.3 275 53.5
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 5.5e-67 259.6 282 52.5
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 4.6e-66 256.5 523 50.5
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.3e-65 254.2 268 56.3
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 2.3e-65 254.2 261 54.4
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.4e-62 245.0 290 46.2
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 5.3e-62 243.0 499 43.7
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 3.1e-54 217.2 327 67.0
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 5.3e-54 216.5 271 75.6
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 7.9e-50 202.6 182 58.8
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.9e-48 198.0 100 98.0
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.3e-41 174.5 428 32.2
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 5.7e-40 169.9 239 64.4
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 2.8e-39 167.5 123 69.1
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 3.8e-36 157.1 183 49.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 8.5e-36 156.0 388 52.3
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.9e-35 154.8 132 60.6
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 4.4e-32 143.7 201 50.2
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 8.5e-28 129.4 179 48.6
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 7.2e-27 126.3 177 49.2
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 2.7e-26 124.4 181 44.2
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 6.7e-25 119.8 146 48.6
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 2.0e-24 118.2 126 46.8
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.6e-24 117.9 151 51.0
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 5.3e-22 110.2 120 46.7
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.5e-21 107.1 448 32.8
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 7.7e-21 106.3 509 27.7
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 2.2e-20 104.8 143 46.9
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.7e-18 97.8 48 100.0
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 8.0e-18 96.3 95 49.5
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 7.5e-16 89.7 100 49.0
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 1.3e-15 89.0 334 28.7
Actinidia35724 Actinidia chinensis HOM05D006674 ORTHO05D007954 2.4e-14 84.7 71 67.6
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 4.1e-14 84.0 82 57.3
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 2.0e-13 81.6 123 42.3
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 2.7e-13 81.3 61 60.7
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 3.5e-13 80.9 68 57.4
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 1.3e-12 79.0 72 58.3
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 1.7e-12 78.6 212 30.7
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.6e-10 70.9 35 100.0
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 8.8e-09 66.2 61 57.4
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 5.7e-08 63.5 68 50.0
arahy.Tifrunner.gnm1.ann1.7360MD Arachis hypogaea HOM05D002184 ORTHO05D002379 3.7e-07 60.8 70 45.7
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 4.9e-07 60.5 104 36.5
Nitab4.5_0009075g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 8.3e-07 59.7 62 50.0
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 1.4e-06 58.9 36 72.2
arahy.Tifrunner.gnm1.ann1.MX1HDN Arachis hypogaea HOM05D006674 ORTHO05D007954 5.4e-06 57.0 46 58.7
arahy.Tifrunner.gnm1.ann1.PS0MXP Arachis hypogaea HOM05D006674 ORTHO05D007954 5.4e-06 57.0 46 58.7


User provided reference genes

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