Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 6.9e-65 250.4 116 100.0
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 7.6e-64 246.9 116 98.3
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 1.1e-49 199.9 116 81.0
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.1e-45 185.7 116 76.7
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 9.7e-43 176.8 117 70.1
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.8e-41 172.6 117 68.4
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 9.1e-41 170.2 116 69.0
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 9.1e-41 170.2 117 67.5
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.5e-40 169.5 103 71.8
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.0e-39 166.8 104 69.2
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 2.2e-39 165.6 110 67.3
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 8.5e-39 163.7 115 67.8
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.4e-38 162.9 118 67.8
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 4.7e-37 157.9 117 62.4
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.5e-35 152.9 117 63.2
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.3e-34 149.8 111 61.3
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.7e-34 149.4 117 59.8
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 2.2e-34 149.1 117 63.2
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 3.7e-34 148.3 114 60.5
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 4.8e-34 147.9 107 64.5
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 6.3e-34 147.5 97 72.2
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 8.2e-34 147.1 104 63.5
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 1.1e-33 146.7 117 59.0
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.4e-33 146.4 98 66.3
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 1.4e-33 146.4 107 60.7
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 1.8e-33 146.0 116 60.3
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 1.8e-33 146.0 116 63.8
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 3.1e-33 145.2 115 59.1
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 5.3e-33 144.4 105 61.9
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 7.0e-33 144.1 105 60.0
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.2e-32 143.3 103 63.1
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.2e-32 143.3 107 64.5
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 2.0e-32 142.5 123 56.1
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 2.0e-32 142.5 90 72.2
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.6e-32 142.1 105 59.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 3.5e-32 141.7 105 59.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 7.7e-32 140.6 97 66.0
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 7.7e-32 140.6 119 53.8
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.0e-31 140.2 95 69.5
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.9e-31 138.7 116 56.0
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 5.0e-31 137.9 96 64.6
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 8.5e-31 137.1 103 61.2
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.1e-30 136.7 103 55.3
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 1.1e-30 136.7 124 58.9
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.5e-30 136.3 102 59.8
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.9e-30 136.0 95 62.1
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.9e-30 136.0 95 62.1
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.9e-30 136.0 116 56.0
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.5e-30 135.6 102 62.7
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.5e-30 135.6 102 62.7
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 3.2e-30 135.2 93 65.6
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.2e-30 134.8 103 62.1
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.2e-30 134.8 103 62.1
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.2e-30 134.8 103 62.1
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 4.2e-30 134.8 95 66.3
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 5.5e-30 134.4 104 61.5
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 5.5e-30 134.4 116 56.0
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 5.5e-30 134.4 114 57.9
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 7.2e-30 134.0 116 56.0
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 9.4e-30 133.7 103 57.3
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.2e-29 133.3 102 60.8
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 2.1e-29 132.5 103 60.2
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 2.7e-29 132.1 101 59.4
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 4.7e-29 131.3 87 67.8
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 1.4e-28 129.8 103 59.2
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.4e-28 129.8 89 64.0
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 1.8e-28 129.4 104 57.7
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 3.9e-28 128.3 114 53.5
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 6.7e-28 127.5 111 55.9
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.1e-27 126.7 107 55.1
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 2.6e-27 125.6 116 54.3
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 2.6e-27 125.6 116 54.3
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.3e-27 125.2 102 53.9
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 4.4e-27 124.8 98 60.2
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 4.4e-27 124.8 86 67.4
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 4.4e-27 124.8 86 67.4
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 9.7e-27 123.6 122 50.0
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 9.7e-27 123.6 102 53.9
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 1.7e-26 122.9 94 59.6
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 1.7e-26 122.9 85 67.1
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.7e-26 122.9 101 55.4
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.2e-26 122.5 104 54.8
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 6.3e-26 120.9 87 62.1
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 2.4e-25 119.0 83 65.1
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.5e-24 114.8 84 64.3
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 5.9e-24 114.4 88 54.5
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.2e-23 112.5 87 59.8
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 5.5e-22 107.8 88 58.0
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 3.6e-21 105.1 83 57.8
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 2.6e-19 99.0 82 54.9
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.8e-17 92.8 76 51.3
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.8e-17 92.8 64 65.6
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 3.5e-16 88.6 95 46.3
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 5.0e-15 84.7 117 44.4
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.5e-14 83.2 64 59.4
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 7.2e-14 80.9 103 40.8
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 6.1e-13 77.8 102 40.2
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 1.8e-09 66.2 37 59.5
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 7.0e-09 64.3 39 79.5
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.5e-08 62.0 69 42.0
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 5.9e-08 61.2 44 54.5
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 1.1e-06 57.0 30 73.3
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 7.2e-06 54.3 36 47.2


User provided reference genes

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