Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023190 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D033926 1.1e-31 139.4 74 100.0
Rhsim03G0187800 Rhododendron simsii HOM05D000141 ORTHO05D002946 1.7e-21 105.5 72 73.6
vmacro06658 Vaccinium macrocarpon HOM05D000108 ORTHO05D002946 5.6e-20 100.5 72 69.4
Dinv28417 Davidia involucrata HOM05D000108 ORTHO05D002946 3.0e-13 78.2 71 62.0
Actinidia34130 Actinidia chinensis HOM05D000108 ORTHO05D002946 1.9e-12 75.5 73 63.0
SGA_v2.0_scaffold60G21070 Striga asiatica HOM05D001542 ORTHO05D001416 1.6e-11 72.4 73 54.8
CAN.G1175.12 Capsicum annuum HOM05D000108 ORTHO05D002946 2.8e-11 71.6 75 56.0
Oeu056273.1 Olea europaea HOM05D000108 ORTHO05D002946 8.1e-11 70.1 73 53.4
PGSC0003DMG400015789 Solanum tuberosum HOM05D000108 ORTHO05D002946 1.1e-10 69.7 75 53.3
Peaxi162Scf00444g00429 Petunia axillaris HOM05D000108 ORTHO05D002946 1.8e-10 68.9 75 54.7
TAR636G3480 Trochodendron aralioides HOM05D000108 ORTHO05D002946 3.1e-10 68.2 75 53.3
GSVIVG01028911001 Vitis vinifera HOM05D000141 ORTHO05D002946 3.1e-10 68.2 73 57.5
Hma1.2p1_0227F.1_g095860 Hydrangea macrophylla HOM05D000108 ORTHO05D002946 4.0e-10 67.8 72 52.8
Actinidia25887 Actinidia chinensis HOM05D000108 ORTHO05D002946 5.3e-10 67.4 63 58.7
Solyc03g025470.4 Solanum lycopersicum HOM05D000108 ORTHO05D002946 5.3e-10 67.4 75 50.7
MSTRG.27105 Avicennia marina HOM05D000108 ORTHO05D002946 1.2e-09 66.2 73 52.1
Nitab4.5_0004439g0060 Nicotiana tabacum HOM05D000108 ORTHO05D002946 1.5e-09 65.9 75 53.3
Sopen03g004310 Solanum pennellii HOM05D000108 ORTHO05D002946 3.4e-09 64.7 75 50.7
TAR623G0328 Trochodendron aralioides HOM05D000108 ORTHO05D002946 5.8e-09 63.9 72 54.2
Nitab4.5_0000084g0080 Nicotiana tabacum HOM05D000108 ORTHO05D002946 2.2e-08 62.0 75 50.7
COL.COLO4_28049 Corchorus olitorius HOM05D000108 ORTHO05D033926 3.8e-08 61.2 58 55.2
Thecc.03G179700 Theobroma cacao HOM05D000108 ORTHO05D002946 8.4e-08 60.1 59 52.5
Migut.F00327 Erythranthe guttata HOM05D000108 ORTHO05D002946 1.4e-07 59.3 68 44.1
DCAR_020259 Daucus carota HOM05D000108 ORTHO05D002946 3.2e-07 58.2 57 54.4
MD01G1204800 Malus domestica HOM05D000108 ORTHO05D002946 3.2e-07 58.2 70 54.3
Nn6g33425 Nelumbo nucifera HOM05D000108 ORTHO05D002946 4.2e-07 57.8 71 52.1
Lj8C22T8 Lonicera japonica HOM05D000108 ORTHO05D002946 5.5e-07 57.4 62 51.6
COL.COLO4_34155 Corchorus olitorius HOM05D001542 ORTHO05D033926 7.1e-07 57.0 56 55.4
Duzib068G1445 Durio zibethinus HOM05D000108 ORTHO05D002946 9.3e-07 56.6 59 49.2
CANSAT21G1824 Cannabis sativa HOM05D000108 ORTHO05D002946 1.6e-06 55.8 59 54.2
Prupe.2G297200 Prunus persica HOM05D000108 ORTHO05D002946 1.6e-06 55.8 74 50.0
Lju891C3T6 Lonicera japonica HOM05D000108 ORTHO05D002946 2.1e-06 55.5 57 47.4
Gohir.A12G256300 Gossypium hirsutum HOM05D000108 ORTHO05D002946 7.9e-06 53.5 59 45.8


User provided reference genes

Program Settings