Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023178 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 9.8e-106 386.7 184 100.0
CSS0028074 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D026295 3.3e-93 345.1 184 92.4
CSS0024141 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 7.5e-90 334.0 213 80.3
CSS0004547 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.3e-85 318.2 199 81.4
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 1.2e-34 150.6 112 64.3
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 2.0e-34 149.8 113 64.6
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 2.0e-34 149.8 121 62.0
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 2.6e-34 149.4 126 59.5
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 5.8e-34 148.3 110 62.7
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 7.6e-34 147.9 110 60.9
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 2.2e-33 146.4 111 62.2
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 8.4e-33 144.4 110 61.8
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 1.1e-32 144.1 110 61.8
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 4.2e-32 142.1 114 58.8
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 4.2e-32 142.1 114 58.8
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 9.3e-32 141.0 114 59.6
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 2.7e-31 139.4 126 51.6
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 4.6e-31 138.7 109 60.6
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 7.9e-31 137.9 110 57.3
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 1.3e-30 137.1 110 60.0
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 1.8e-30 136.7 110 60.0
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 1.8e-30 136.7 110 64.5
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 3.9e-30 135.6 114 57.0
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 1.1e-29 134.0 103 65.0
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 2.5e-29 132.9 110 58.2
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 4.3e-29 132.1 131 51.1
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 7.4e-29 131.3 111 55.9
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 7.4e-29 131.3 111 55.9
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 1.3e-28 130.6 116 58.6
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 2.8e-28 129.4 117 53.8
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 3.7e-28 129.0 128 50.8
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 6.3e-28 128.3 106 57.5
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 1.1e-27 127.5 117 53.8
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 1.8e-27 126.7 109 55.0
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 2.4e-27 126.3 111 54.1
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 2.4e-27 126.3 126 47.6
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 5.3e-27 125.2 112 57.1
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 5.3e-27 125.2 128 49.2
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 6.9e-27 124.8 110 54.5
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 6.9e-27 124.8 101 60.4
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 6.9e-27 124.8 101 60.4
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 6.9e-27 124.8 110 57.3
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 6.9e-27 124.8 110 57.3
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 1.2e-26 124.0 111 57.7
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 1.2e-26 124.0 110 57.3
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 1.5e-26 123.6 112 56.2
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 2.0e-26 123.2 102 58.8
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 2.0e-26 123.2 129 50.4
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 2.6e-26 122.9 111 50.5
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 3.4e-26 122.5 110 52.7
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 3.4e-26 122.5 128 48.4
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 4.5e-26 122.1 111 54.1
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 7.7e-26 121.3 126 51.6
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 1.3e-25 120.6 104 58.7
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 2.2e-25 119.8 128 47.7
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 2.9e-25 119.4 110 54.5
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 2.9e-25 119.4 102 55.9
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 2.9e-25 119.4 110 52.7
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 2.9e-25 119.4 136 47.8
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 5.0e-25 118.6 104 57.7
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 6.5e-25 118.2 84 65.5
SEGI_10872 Sequoiadendron giganteum HOM05D005523 ORTHO05D007089 6.5e-25 118.2 102 55.9
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 8.5e-25 117.9 118 51.7
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 8.5e-25 117.9 110 54.5
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 1.1e-24 117.5 110 54.5
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 1.1e-24 117.5 102 54.9
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 1.1e-24 117.5 96 60.4
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 1.4e-24 117.1 102 57.8
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.9e-24 116.7 118 51.7
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 4.2e-24 115.5 118 50.8
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 4.2e-24 115.5 101 57.4
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 7.2e-24 114.8 104 55.8
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 9.4e-24 114.4 111 47.7
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 9.4e-24 114.4 94 58.5
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 1.6e-23 113.6 110 50.9
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 3.6e-23 112.5 110 49.1
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 3.6e-23 112.5 118 51.7
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 3.6e-23 112.5 118 50.0
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 6.1e-23 111.7 168 39.9
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 7.9e-23 111.3 106 51.9
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 3.0e-22 109.4 126 50.0
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 8.8e-22 107.8 114 50.0
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 1.1e-21 107.5 109 49.5
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 1.1e-21 107.5 114 47.4
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 2.5e-21 106.3 120 45.8
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 2.2e-20 103.2 114 49.1
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 2.8e-20 102.8 122 45.1
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 2.8e-20 102.8 114 47.4
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 2.8e-20 102.8 114 47.4
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 1.4e-19 100.5 111 46.8
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 2.4e-19 99.8 110 47.3
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 5.3e-19 98.6 114 46.5
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 6.9e-19 98.2 102 52.0
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 6.9e-19 98.2 110 46.4
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 1.5e-18 97.1 106 46.2
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 7.7e-18 94.7 108 45.4
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 3.8e-17 92.4 114 40.4
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 6.5e-17 91.7 111 41.4
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 8.5e-17 91.3 67 61.2
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 4.2e-16 89.0 102 48.0
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 9.7e-13 77.8 71 46.5
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 7.0e-11 71.6 56 51.8
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 1.5e-08 63.9 46 69.6
CiPaw.04G124200 Carya illinoinensis HOM05D005523 ORTHO05D007089 4.2e-08 62.4 111 36.0
Os12g0574900 Oryza sativa ssp. japonica HOM05D005523 ORTHO05D007089 5.5e-08 62.0 78 41.0
TAR374G1311 Trochodendron aralioides HOM05D005523 ORTHO05D007089 1.6e-07 60.5 57 49.1
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 1.4e-06 57.4 38 73.7
HanXRQChr15g0470871 Helianthus annuus HOM05D005523 ORTHO05D007089 2.3e-06 56.6 45 57.8
Actinidia11693 Actinidia chinensis HOM05D005523 ORTHO05D026295 8.8e-06 54.7 37 62.2


User provided reference genes

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