Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 2.7e-66 255.4 144 100.0
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 2.7e-26 122.5 132 56.1
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 1.2e-23 113.6 133 54.1
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 9.0e-22 107.5 139 52.5
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 2.9e-20 102.4 130 46.2
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.9e-19 99.8 130 45.4
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 9.3e-19 97.4 130 45.4
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 1.6e-18 96.7 130 46.9
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.1e-18 96.3 131 48.9
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 2.7e-18 95.9 130 46.2
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 3.5e-18 95.5 129 48.8
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 4.6e-18 95.1 128 43.8
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 8.7e-17 90.9 119 49.6
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 1.9e-16 89.7 133 47.4
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 2.5e-16 89.4 123 46.3
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 3.6e-15 85.5 126 42.9
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 1.4e-14 83.6 131 45.8
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 1.2e-13 80.5 125 43.2
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 1.2e-13 80.5 134 46.3
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 2.0e-13 79.7 133 44.4
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 2.0e-13 79.7 133 44.4
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 4.5e-13 78.6 124 41.9
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 4.5e-13 78.6 116 50.0
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 5.8e-13 78.2 124 41.9
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 1.9e-11 73.2 129 41.1
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 1.3e-09 67.0 134 37.3
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 5.1e-09 65.1 115 43.5
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 1.5e-08 63.5 129 37.2
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 4.8e-07 58.5 101 45.5
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 8.1e-07 57.8 118 38.1
Nn4g22968 Nelumbo nucifera HOM05D009197 ORTHO05D010857 4.0e-06 55.5 126 39.7


User provided reference genes

Program Settings