Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023144 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 1.1e-72 276.6 142 100.0
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 5.9e-42 174.5 123 74.0
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 1.0e-41 173.7 119 76.5
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 2.5e-40 169.1 122 73.0
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 1.2e-39 166.8 127 69.3
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 5.9e-34 147.9 122 63.1
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 1.0e-33 147.1 122 62.3
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 3.2e-32 142.1 122 60.7
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 2.1e-31 139.4 126 60.3
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 1.8e-30 136.3 122 58.2
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 1.5e-29 133.3 120 60.0
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 2.0e-29 132.9 122 59.0
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 3.3e-29 132.1 121 57.0
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 5.7e-29 131.3 121 57.0
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 9.7e-29 130.6 121 57.9
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.1e-27 127.1 122 52.5
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.4e-27 126.7 129 49.6
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.4e-27 125.9 122 53.3
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 4.1e-27 125.2 121 56.2
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 7.0e-27 124.4 122 52.5
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 1.2e-26 123.6 134 51.5
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 3.5e-26 122.1 131 46.6
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 4.5e-26 121.7 121 56.2
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.0e-25 120.6 122 50.0
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 1.0e-25 120.6 128 48.4
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 1.3e-25 120.2 117 51.3
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 1.7e-25 119.8 125 53.6
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 3.8e-25 118.6 122 50.8
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 1.1e-24 117.1 120 52.5
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 1.5e-24 116.7 128 46.1
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 1.9e-24 116.3 132 46.2
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 3.2e-24 115.5 121 53.7
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 3.2e-24 115.5 120 50.8
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 4.2e-24 115.2 122 50.0
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 7.2e-24 114.4 132 47.7
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 7.2e-24 114.4 121 52.9
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 1.2e-23 113.6 120 50.8
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 1.2e-23 113.6 131 46.6
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.6e-23 113.2 136 50.0
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 2.1e-23 112.8 131 45.8
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.7e-23 112.5 121 52.9
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 3.6e-23 112.1 121 48.8
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 4.7e-23 111.7 125 49.6
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 8.0e-23 110.9 120 50.0
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.0e-22 110.5 121 51.2
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 1.0e-22 110.5 121 47.1
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.3e-22 109.4 131 45.8
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 6.8e-22 107.8 122 49.2
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 6.8e-22 107.8 120 48.3
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 8.8e-22 107.5 122 48.4
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 1.2e-21 107.1 128 42.2
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 3.4e-21 105.5 122 46.7
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 4.4e-21 105.1 122 47.5
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 4.4e-21 105.1 122 44.3
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 5.7e-21 104.8 122 50.0
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 7.5e-21 104.4 120 50.8
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 7.5e-21 104.4 121 52.9
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.3e-20 103.6 120 46.7
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 1.7e-20 103.2 126 48.4
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 4.8e-20 101.7 122 44.3
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 4.8e-20 101.7 128 43.8
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.3e-20 101.3 148 41.9
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 8.3e-20 100.9 136 42.6
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 1.8e-19 99.8 127 44.1
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 1.8e-19 99.8 131 43.5
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 4.1e-19 98.6 127 44.1
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 4.1e-19 98.6 122 45.1
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 4.1e-19 98.6 136 44.1
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 4.1e-19 98.6 123 43.1
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 5.4e-19 98.2 127 42.5
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 7.0e-19 97.8 164 39.0
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 7.0e-19 97.8 127 44.1
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 9.1e-19 97.4 127 42.5
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 9.1e-19 97.4 127 41.7
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 1.2e-18 97.1 123 44.7
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 2.0e-18 96.3 127 41.7
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 2.7e-18 95.9 122 43.4
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 3.5e-18 95.5 122 42.6
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 4.5e-18 95.1 122 43.4
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 5.9e-18 94.7 127 40.2
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 7.7e-18 94.4 127 40.9
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 2.3e-17 92.8 126 37.3
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 3.8e-17 92.0 127 40.9
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 8.6e-17 90.9 127 40.9
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 8.6e-17 90.9 127 40.9
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 1.1e-16 90.5 127 40.9
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 1.5e-16 90.1 120 40.8
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 1.9e-16 89.7 133 36.8
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 5.5e-16 88.2 127 39.4
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 5.5e-16 88.2 127 39.4
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.6e-15 86.7 124 39.5
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 2.8e-15 85.9 112 38.4
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 6.1e-15 84.7 104 43.3
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 7.5e-13 77.8 96 44.8
vmacro17797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 9.8e-13 77.4 54 68.5
SHI11092 Sapria himalayana HOM05D002451 ORTHO05D005601 1.7e-12 76.6 116 39.7
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 1.4e-11 73.6 90 43.3
TAR624G0921 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.4e-11 73.6 64 59.4
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 4.1e-11 72.0 110 38.2
TPR.G18859 Trifolium pratense HOM05D002451 ORTHO05D005601 7.0e-11 71.2 101 41.6
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.2e-10 70.5 74 54.1


User provided reference genes

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