Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.7e-81 305.4 148 100.0
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 7.6e-68 260.8 151 82.8
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 3.6e-65 251.9 143 81.8
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 8.7e-64 247.3 142 81.0
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.9e-63 246.1 141 80.1
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 9.7e-63 243.8 139 79.9
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 6.3e-62 241.1 138 81.9
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 2.4e-61 239.2 141 78.0
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 3.1e-61 238.8 142 76.1
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 6.9e-61 237.7 142 78.2
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.0e-60 236.1 142 75.4
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 2.6e-60 235.7 145 77.9
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 4.5e-60 235.0 142 77.5
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 4.5e-60 235.0 137 77.4
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 4.5e-60 235.0 139 77.7
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 5.9e-60 234.6 141 75.2
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 7.7e-60 234.2 144 75.7
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 7.7e-60 234.2 147 78.9
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 2.2e-59 232.6 138 77.5
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.8e-59 231.9 139 75.5
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 6.5e-59 231.1 144 74.3
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 6.5e-59 231.1 142 77.5
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 2.5e-58 229.2 138 76.8
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 5.5e-58 228.0 145 77.2
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 5.5e-58 228.0 142 73.9
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 5.5e-58 228.0 142 73.9
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 7.2e-58 227.6 138 76.8
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.2e-57 226.9 141 72.3
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 2.7e-57 225.7 132 78.0
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 2.7e-57 225.7 141 75.9
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 3.6e-57 225.3 142 73.2
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 4.7e-57 224.9 201 60.7
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 7.9e-57 224.2 142 73.2
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.0e-56 223.8 144 72.2
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 1.0e-56 223.8 144 72.2
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.4e-56 223.4 139 72.7
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.8e-56 223.0 133 75.9
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.8e-56 223.0 135 77.0
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 2.3e-56 222.6 132 76.5
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 2.3e-56 222.6 139 72.7
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 3.0e-56 222.2 139 71.9
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 3.9e-56 221.9 132 78.0
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 3.9e-56 221.9 133 78.2
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.1e-55 220.3 139 72.7
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.0e-55 219.5 144 72.2
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.6e-55 219.2 139 71.9
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.6e-55 219.2 140 72.1
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 2.6e-55 219.2 138 73.2
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 5.7e-55 218.0 141 69.5
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 5.7e-55 218.0 140 75.7
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 7.4e-55 217.6 135 73.3
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 9.7e-55 217.2 187 62.0
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.3e-54 216.9 139 71.2
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.3e-54 216.9 135 71.9
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 1.7e-54 216.5 139 71.9
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.7e-54 215.3 133 75.2
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 3.7e-54 215.3 140 72.1
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 4.8e-54 214.9 133 75.2
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 8.2e-54 214.2 142 71.8
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 1.1e-53 213.8 135 70.4
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.8e-53 213.0 141 69.5
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.4e-53 212.6 142 71.1
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 4.1e-53 211.8 138 69.6
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.3e-53 211.5 135 74.8
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 6.9e-53 211.1 145 67.6
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 6.9e-53 211.1 135 69.6
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 1.5e-52 209.9 160 64.4
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 2.6e-52 209.1 137 68.6
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.6e-52 209.1 142 69.7
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 7.7e-52 207.6 172 61.0
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 7.7e-52 207.6 135 71.9
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 5.0e-51 204.9 112 82.1
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.1e-50 203.8 129 75.2
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 2.5e-50 202.6 141 68.1
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 2.5e-50 202.6 123 77.2
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 9.4e-50 200.7 135 68.1
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 2.1e-49 199.5 147 63.9
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 6.1e-49 198.0 142 62.0
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.0e-48 197.2 106 83.0
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 8.8e-48 194.1 108 79.6
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.1e-47 193.7 131 69.5
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.2e-46 189.5 134 61.2
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 6.3e-46 188.0 107 76.6
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 7.0e-45 184.5 115 73.0
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 1.7e-43 179.9 103 74.8
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 1.9e-42 176.4 127 63.8
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 2.7e-41 172.6 167 51.5
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.0e-39 166.4 114 70.2
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.2e-36 157.1 155 50.3
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 1.3e-35 153.7 137 54.0
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.5e-34 150.2 121 59.5
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 3.2e-34 149.1 118 57.6
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 3.2e-34 149.1 136 55.1
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 4.0e-32 142.1 144 47.9
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 3.4e-31 139.0 136 47.8
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.3e-30 137.1 97 64.9
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.1e-29 134.0 141 49.6
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.9e-26 123.2 130 50.0
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.6e-25 120.2 89 55.1
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.8e-25 119.4 59 89.8
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 6.8e-24 114.8 68 73.5
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.2e-23 114.0 100 54.0
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 1.5e-23 113.6 89 51.7
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 2.8e-22 109.4 82 64.6
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 2.1e-17 93.2 88 47.7
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 5.8e-15 85.1 72 61.1


User provided reference genes

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