Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 8.7e-105 383.6 194 100.0
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.1e-103 379.0 194 99.0
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.1e-103 379.0 194 99.0
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 9.7e-96 353.6 194 94.8
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.2e-95 352.4 194 94.3
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 4.5e-93 344.7 194 93.3
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.3e-92 343.2 198 90.9
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.9e-60 235.7 175 73.1
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.5e-59 233.4 175 73.1
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 8.3e-47 191.0 133 73.7
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 1.6e-45 186.8 136 69.9
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 1.2e-42 177.2 141 66.7
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 7.8e-37 157.9 133 63.2
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 7.8e-37 157.9 133 63.2
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 7.8e-37 157.9 133 63.2
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 7.8e-37 157.9 133 63.2
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 2.2e-31 139.8 126 57.1
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 3.7e-31 139.0 132 53.0
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 1.1e-30 137.5 127 56.7
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 1.4e-30 137.1 126 53.2
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 4.1e-30 135.6 121 55.4
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 4.1e-30 135.6 122 56.6
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 1.6e-29 133.7 126 50.0
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 1.6e-29 133.7 130 49.2
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 2.7e-29 132.9 122 51.6
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 3.5e-29 132.5 122 54.1
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 6.0e-29 131.7 126 50.8
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 7.8e-29 131.3 138 44.9
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 1.3e-28 130.6 126 53.2
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 3.0e-28 129.4 122 50.8
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 3.9e-28 129.0 130 51.5
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 8.6e-28 127.9 142 45.1
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 1.5e-27 127.1 134 47.0
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.5e-27 126.3 126 49.2
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 4.3e-27 125.6 126 49.2
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 4.3e-27 125.6 131 51.9
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 7.3e-27 124.8 126 47.6
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 7.3e-27 124.8 129 49.6
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 1.6e-26 123.6 131 47.3
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 3.6e-26 122.5 140 46.4
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 6.2e-26 121.7 157 42.7
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 8.1e-26 121.3 126 48.4
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 2.3e-25 119.8 131 48.9
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.0e-24 116.7 131 48.1
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 3.4e-24 115.9 124 47.6
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 4.4e-24 115.5 123 48.8
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 5.8e-24 115.2 125 43.2
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 5.8e-24 115.2 141 43.3
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 7.6e-24 114.8 126 48.4
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 2.2e-23 113.2 128 45.3
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 2.2e-23 113.2 129 48.1
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 2.2e-23 113.2 126 46.0
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 4.9e-23 112.1 126 48.4
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 8.4e-23 111.3 126 43.7
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 8.4e-23 111.3 126 43.7
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 1.4e-22 110.5 132 48.5
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.4e-22 109.8 106 52.8
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 5.4e-22 108.6 134 41.8
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 5.4e-22 108.6 135 42.2
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 1.7e-20 103.6 141 46.8
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 5.1e-20 102.1 126 43.7
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 5.1e-20 102.1 126 46.8
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 2.5e-19 99.8 137 40.9
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 7.3e-19 98.2 130 36.2
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 9.6e-19 97.8 126 44.4
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 2.0e-16 90.1 104 45.2
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 2.6e-16 89.7 55 65.5
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 4.4e-16 89.0 131 38.9
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 1.6e-13 80.5 54 61.1
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 4.6e-13 79.0 50 64.0
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 1.7e-12 77.0 76 51.3
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 3.0e-12 76.3 123 38.2
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 3.9e-12 75.9 100 42.0
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 1.5e-11 73.9 104 35.6
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 4.8e-10 68.9 41 68.3
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 9.9e-08 61.2 50 44.0
CBR_g22259 Chara braunii HOM05D007849 ORTHO05D009964 1.4e-06 57.4 55 47.3


User provided reference genes

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