Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0006533 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 9.2e-43 176.4 84 100.0
CSS0023114 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 9.2e-43 176.4 84 100.0
CSS0021980 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 7.3e-40 166.8 84 95.2
CSS0028897 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 7.3e-40 166.8 84 95.2
PSO339G1989 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-11 73.2 62 58.1
Thecc.01G232700 Theobroma cacao HOM05D000004 ORTHO05D000002 1.1e-11 73.2 76 47.4
Thecc.03G066200 Theobroma cacao HOM05D000004 ORTHO05D000002 1.4e-11 72.8 76 48.7
Thecc.05G097300 Theobroma cacao HOM05D000004 ORTHO05D000002 1.6e-10 69.3 76 44.7
SEGI_07278 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.3e-09 66.2 55 54.5
TWI14G0262 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 2.3e-09 65.5 66 47.0
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 8.7e-09 63.5 77 41.6
SEGI_34349 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.1e-08 63.2 55 50.9
CSS0043413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-08 62.8 56 50.0
Prupe.8G229300 Prunus persica HOM05D000650 ORTHO05D000735 1.9e-08 62.4 59 52.5
SEGI_26455 Sequoiadendron giganteum HOM05D000004 ORTHO05D024702 1.9e-08 62.4 78 42.3
CSS0004631 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-08 62.0 56 50.0
SEGI_24325 Sequoiadendron giganteum HOM05D020499 ORTHO05D000002 3.3e-08 61.6 60 46.7
SEGI_13621 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.3e-08 61.2 64 43.8
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.6e-08 60.8 53 54.7
CSS0023711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.3e-08 60.5 55 49.1
Hma1.2p1_0085F.1_g044690 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.3e-08 60.5 84 38.1
Rhsim02G0058400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.2e-07 59.7 56 48.2
EL10Ac4g09853 Beta vulgaris HOM05D000004 ORTHO05D000002 1.6e-07 59.3 56 46.4
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-07 59.3 73 41.1
SEGI_00165 Sequoiadendron giganteum HOM05D000067 ORTHO05D000002 1.6e-07 59.3 73 46.6
BcaC05g27996 Brassica carinata HOM05D000004 ORTHO05D000002 2.1e-07 58.9 56 46.4
CSS0049161 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-07 58.9 56 48.2
Hma1.2p1_0042F.1_g025490 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.1e-07 58.9 55 52.7
Rhsim02G0024000 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.1e-07 58.9 57 45.6
SEGI_35758 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 2.1e-07 58.9 57 52.6
CSS0008496 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-07 58.2 56 46.4
CSS0022143 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-07 58.2 56 46.4
CSS0000480 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-07 57.8 56 46.4
CSS0024529 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-07 57.8 56 46.4
Atru.chr6.117 Acer truncatum HOM05D000004 ORTHO05D000002 6.2e-07 57.4 59 45.8
CSS0011571 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.2e-07 57.4 56 48.2
SEGI_00646 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.2e-07 57.4 56 50.0
SEGI_22387 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.2e-07 57.4 71 43.7
Hma1.2p1_1832F.1_g304590 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 8.1e-07 57.0 80 38.8
TWI73G0917 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-06 56.2 53 50.9
TWI77G0040 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 1.4e-06 56.2 57 42.1
CSS0023637 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.8e-06 55.8 56 44.6
TWI09G1040 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.4e-06 55.5 53 52.8
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 3.1e-06 55.1 59 45.8
RcHm_v2.0_Chr3g0461871 Rosa chinensis HOM05D000004 ORTHO05D000002 3.1e-06 55.1 55 49.1
RcHm_v2.0_Chr4g0427231 Rosa chinensis HOM05D000004 ORTHO05D000002 3.1e-06 55.1 55 49.1
Hma1.2p1_0975F.1_g243150 Hydrangea macrophylla HOM05D034186 ORTHO05D000002 4.0e-06 54.7 63 41.3
CSS0034640 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.2e-06 54.3 54 46.3
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 5.2e-06 54.3 56 41.1
Hma1.2p1_0296F.1_g116850 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.2e-06 54.3 61 41.0
MBI02_g46969_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000002 5.2e-06 54.3 58 44.8
PSO063G5531 Papaver somniferum HOM05D000004 ORTHO05D000002 5.2e-06 54.3 56 46.4
Rhsim06G0128700 Rhododendron simsii HOM05D000004 ORTHO05D012524 5.2e-06 54.3 61 45.9
SEGI_40658 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.2e-06 54.3 58 44.8
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.2e-06 54.3 57 42.1
PSO063G0884 Papaver somniferum HOM05D001642 ORTHO05D000002 6.9e-06 53.9 57 47.4
SHI08945 Sapria himalayana HOM05D000004 ORTHO05D000002 6.9e-06 53.9 63 41.3
SEGI_39755 Sequoiadendron giganteum HOM05D001337 ORTHO05D000002 6.9e-06 53.9 57 49.1
TWI32G0910 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.9e-06 53.9 64 40.6
TWI34G1848 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.9e-06 53.9 57 42.1
BcaC03g16463 Brassica carinata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 55 43.6
QL02p062220 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 46.4
QL05p044227 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 46.4
QL05p084077 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 46.4
QL93p0053_0688 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 46.4
SEGI_04515 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 9.0e-06 53.5 55 49.1
SEGI_32472 Sequoiadendron giganteum HOM05D000028 ORTHO05D000296 9.0e-06 53.5 53 52.8
TWI12G0374 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 9.0e-06 53.5 71 38.0
TWI74G1083 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 9.0e-06 53.5 71 38.0


User provided reference genes

Program Settings