Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.4e-195 686.0 337 100.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 5.7e-168 594.3 336 85.4
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 7.6e-165 583.9 337 85.2
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.5e-164 580.9 326 87.1
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-163 580.1 337 84.9
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-163 580.1 332 84.9
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 6.3e-159 564.3 324 84.0
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 5.9e-157 557.8 335 79.4
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.7e-156 556.2 336 81.2
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 8.5e-156 553.9 336 79.5
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.5e-155 552.4 336 78.6
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.5e-155 552.4 323 83.3
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 4.2e-155 551.6 334 79.3
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.6e-154 548.1 334 80.2
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 6.1e-154 547.7 335 77.9
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 7.9e-154 547.4 335 78.5
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 7.9e-154 547.4 331 78.9
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.4e-153 546.6 337 78.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.5e-152 542.3 334 79.0
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 7.4e-152 540.8 336 78.0
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 2.2e-151 539.3 337 76.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 6.3e-151 537.7 337 77.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-150 537.0 337 76.3
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.8e-150 536.2 337 75.7
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-149 533.5 335 77.0
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.5e-149 531.6 335 75.5
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 2.2e-148 529.3 333 76.0
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.9e-147 526.2 328 75.6
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.2e-147 525.0 334 76.9
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.1e-146 522.7 335 74.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.0e-145 520.4 331 75.5
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.4e-145 520.0 335 73.4
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.8e-145 519.6 334 73.4
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 3.9e-145 518.5 329 74.2
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 8.8e-145 517.3 337 75.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 8.8e-145 517.3 333 73.9
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.5e-144 516.5 331 74.3
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 2.0e-144 516.2 332 76.5
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.4e-144 514.2 336 75.9
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.3e-143 513.5 337 73.6
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.3e-143 513.5 335 72.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.7e-143 513.1 328 75.0
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 4.8e-143 511.5 332 74.4
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 4.8e-143 511.5 331 74.9
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.4e-142 510.0 331 74.3
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.8e-142 509.6 334 72.2
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.4e-142 509.2 324 75.6
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 4.1e-142 508.4 334 71.3
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 5.3e-142 508.1 333 73.6
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.3e-142 508.1 334 72.8
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.2e-141 506.9 335 71.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 3.5e-141 505.4 337 71.8
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 5.9e-141 504.6 327 72.5
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.9e-141 504.6 336 74.7
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.9e-140 502.3 327 72.5
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.2e-139 498.8 338 73.7
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 7.2e-139 497.7 331 71.6
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.2e-138 496.9 323 74.6
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 2.1e-138 496.1 332 72.6
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.7e-138 495.7 307 77.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.4e-137 493.4 318 75.2
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.3e-137 492.7 334 71.9
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.0e-136 489.6 324 72.5
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 7.4e-136 487.6 331 72.2
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.5e-133 478.8 336 69.6
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.0e-132 477.2 345 69.0
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 3.8e-132 475.3 326 70.2
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 3.8e-132 475.3 326 70.2
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 3.8e-132 475.3 326 70.2
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 5.0e-132 474.9 334 72.8
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.2e-131 472.2 344 68.3
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 3.2e-131 472.2 341 68.0
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.2e-131 472.2 343 67.6
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 4.2e-131 471.9 323 70.6
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 4.2e-131 471.9 323 70.6
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 9.4e-131 470.7 334 68.3
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 2.7e-130 469.2 323 70.0
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 6.1e-130 468.0 336 67.6
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.4e-129 466.8 333 69.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 5.2e-129 464.9 332 67.8
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.3e-127 460.3 336 67.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 7.2e-123 444.5 333 64.6
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.1e-122 441.4 332 66.3
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.0e-121 439.1 321 67.0
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 5.2e-121 438.3 319 66.5
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 8.8e-121 437.6 337 62.9
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 4.4e-120 435.3 336 65.2
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.8e-120 434.1 327 67.9
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.9e-116 422.5 316 62.7
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 8.6e-108 394.4 308 63.3
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.4e-102 376.3 313 59.1
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.2e-98 364.0 324 57.4
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 6.2e-98 361.7 295 61.4
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.4e-96 355.5 209 80.9
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.0e-88 330.1 203 78.3
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 3.5e-85 319.3 215 72.6
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 6.6e-84 315.1 330 50.0
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 9.6e-83 311.2 309 52.4
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.8e-82 309.7 258 59.7
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 8.1e-82 308.1 163 92.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 6.8e-81 305.1 305 51.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 7.3e-75 285.0 205 68.3
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.3e-67 259.6 178 68.5
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 7.6e-64 248.4 161 71.4
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.9e-64 248.1 134 86.6
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-61 241.1 157 75.8
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.6e-56 223.4 242 52.9
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.2e-53 214.5 285 45.6
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.2e-50 201.8 130 73.1
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.4e-48 196.4 144 69.4
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.5e-46 189.1 150 60.7
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.5e-43 180.3 92 88.0
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.5e-35 154.5 126 62.7
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.9e-32 142.5 107 63.6
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.1e-22 111.7 72 76.4
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 1.1e-14 85.1 70 60.0
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.9e-14 84.3 162 37.0
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 2.4e-09 67.4 117 35.9
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.7e-07 61.2 172 30.2
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.5e-06 56.2 215 26.0
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 7.2e-06 55.8 215 30.7


User provided reference genes

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