Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023052 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D020187 3.3e-29 131.0 62 100.0
CSS0028198 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D020187 2.0e-23 111.7 77 75.3
CSS0043243 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D006799 1.1e-16 89.4 62 74.2
Dinv34561 Davidia involucrata HOM05D005044 ORTHO05D006799 4.6e-15 84.0 62 67.7
DCAR_018443 Daucus carota HOM05D005044 ORTHO05D006799 1.7e-14 82.0 62 67.7
Dinv22487 Davidia involucrata HOM05D005044 ORTHO05D006799 1.7e-14 82.0 62 66.1
TAR365G0173 Trochodendron aralioides HOM05D005044 ORTHO05D006799 1.7e-14 82.0 62 69.4
unitig_22.g5954 Utricularia gibba HOM05D005044 ORTHO05D006799 8.6e-14 79.7 60 63.3
Oeu018178.1 Olea europaea HOM05D005044 ORTHO05D006799 1.5e-13 79.0 60 60.0
Gorai.007G141400 Gossypium raimondii HOM05D005044 ORTHO05D006799 1.9e-13 78.6 60 66.7
TWI75G1122 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 1.9e-13 78.6 62 62.9
Duzib133G0403 Durio zibethinus HOM05D005044 ORTHO05D006799 2.5e-13 78.2 60 66.7
VMungo1383G1961 Vigna mungo HOM05D005044 ORTHO05D006799 3.3e-13 77.8 60 65.0
CiPaw.04G181200 Carya illinoinensis HOM05D005044 ORTHO05D006799 4.3e-13 77.4 62 64.5
Peaxi162Scf01826g00011 Petunia axillaris HOM05D005044 ORTHO05D020187 4.3e-13 77.4 63 65.1
SGA_v2.0_scaffold80G25918 Striga asiatica HOM05D005044 ORTHO05D006799 4.3e-13 77.4 60 63.3
Gohir.A11G127000 Gossypium hirsutum HOM05D005044 ORTHO05D006799 7.3e-13 76.6 60 65.0
Manes.05G083800 Manihot esculenta HOM05D005044 ORTHO05D006799 7.3e-13 76.6 62 64.5
RcHm_v2.0_Chr6g0289651 Rosa chinensis HOM05D005044 ORTHO05D006799 7.3e-13 76.6 60 63.3
Migut.N02179 Erythranthe guttata HOM05D005044 ORTHO05D006799 9.5e-13 76.3 60 61.7
Lj1g0021498 Lotus japonicus HOM05D005044 ORTHO05D006799 1.2e-12 75.9 60 65.0
Phvul.001G156000 Phaseolus vulgaris HOM05D005044 ORTHO05D006799 1.2e-12 75.9 60 63.3
Ciclev10019527m.g Citrus clementina HOM05D005044 ORTHO05D006799 1.6e-12 75.5 62 62.9
Solyc10g045390.2 Solanum lycopersicum HOM05D005044 ORTHO05D006799 2.1e-12 75.1 60 60.0
Sopen10g015430 Solanum pennellii HOM05D005044 ORTHO05D006799 2.1e-12 75.1 60 60.0
Cpa.g.sc52.102 Carica papaya HOM05D005044 ORTHO05D006799 2.8e-12 74.7 62 62.9
Nitab4.5_0000393g0090 Nicotiana tabacum HOM05D005044 ORTHO05D020187 2.8e-12 74.7 84 48.8
Prupe.8G232900 Prunus persica HOM05D005044 ORTHO05D006799 3.6e-12 74.3 62 62.9
Sed0025057 Sechium edule HOM05D005044 ORTHO05D006799 3.6e-12 74.3 60 61.7
Atru.chr5.1554 Acer truncatum HOM05D005044 ORTHO05D006799 4.7e-12 73.9 60 63.3
AL5G35690 Arabidopsis lyrata HOM05D005044 ORTHO05D006799 4.7e-12 73.9 60 60.0
AT3G54610 Arabidopsis thaliana HOM05D005044 ORTHO05D006799 4.7e-12 73.9 60 60.0
Carub.0005s2121 Capsella rubella HOM05D005044 ORTHO05D006799 4.7e-12 73.9 60 60.0
Lalb_Chr01g0019911 Lupinus albus HOM05D005044 ORTHO05D006799 4.7e-12 73.9 60 61.7
Psat3g061080 Pisum sativum HOM05D005044 ORTHO05D006799 6.2e-12 73.6 60 63.3
THA.LOC104804692 Tarenaya hassleriana HOM05D005044 ORTHO05D006799 6.2e-12 73.6 60 60.0
Glyma.03G158300 Glycine max HOM05D005044 ORTHO05D006799 8.1e-12 73.2 60 60.0
Glyma.19G160700 Glycine max HOM05D005044 ORTHO05D006799 8.1e-12 73.2 60 60.0
Lalb_Chr25g0290121 Lupinus albus HOM05D005044 ORTHO05D006799 8.1e-12 73.2 60 61.7
QL12p042617 Quercus lobata HOM05D005044 ORTHO05D006799 8.1e-12 73.2 60 63.3
PGR044G0510 Punica granatum HOM05D005044 ORTHO05D006799 1.1e-11 72.8 61 63.9
TWI12G0479 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 1.1e-11 72.8 62 59.7
Hund09563 Selenicereus undatus HOM05D005044 ORTHO05D006799 1.8e-11 72.0 60 60.0
TPR.G19106 Trifolium pratense HOM05D005044 ORTHO05D006799 1.8e-11 72.0 60 63.3
BcaB01g00175 Brassica carinata HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
BcaB02g08448 Brassica carinata HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
BcaC02g09057 Brassica carinata HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
A04p05210 Brassica napus HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
C04p37940 Brassica napus HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
BolC4t25370H Brassica oleracea HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
BraA04t16230Z Brassica rapa HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
MELO3C007015.2 Cucumis melo HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 60.0
CsaV3_6G052930 Cucumis sativus L. HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 60.0
Lj1A57T46 Lonicera japonica HOM05D005044 ORTHO05D006799 2.3e-11 71.6 64 64.1
Sp5g07850 Schrenkiella parvula HOM05D005044 ORTHO05D006799 2.3e-11 71.6 60 58.3
ClCG01G025700 Citrullus lanatus HOM05D005044 ORTHO05D006799 3.1e-11 71.2 60 60.0
Medtr7g096040 Medicago truncatula HOM05D005044 ORTHO05D006799 3.1e-11 71.2 60 61.7
Thhalv10010247m.g Eutrema salsugineum HOM05D005044 ORTHO05D006799 5.2e-11 70.5 60 56.7
BcaC02g09052 Brassica carinata HOM05D005044 ORTHO05D006799 6.8e-11 70.1 60 53.3
BraA04t16227Z Brassica rapa HOM05D005044 ORTHO05D006799 6.8e-11 70.1 60 53.3
C04p37870 Brassica napus HOM05D005044 ORTHO05D006799 8.9e-11 69.7 60 53.3
BolC4t25361H Brassica oleracea HOM05D005044 ORTHO05D006799 8.9e-11 69.7 60 53.3
FAN15G1010 Fragaria x ananassa HOM05D005044 ORTHO05D006799 8.9e-11 69.7 60 60.0
Aqoxy2G03504 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 1.2e-10 69.3 62 58.1
MD10G1193500 Malus domestica HOM05D005044 ORTHO05D006799 1.5e-10 68.9 61 60.7
Nitab4.5_0004093g0020 Nicotiana tabacum HOM05D005044 ORTHO05D020187 1.5e-10 68.9 64 56.2
Thecc.01G268500 Theobroma cacao HOM05D005044 ORTHO05D006799 1.5e-10 68.9 60 56.7
HanXRQChr10g0281481 Helianthus annuus HOM05D005044 ORTHO05D006799 2.0e-10 68.6 62 54.8
SEGI_32822 Sequoiadendron giganteum HOM05D005044 ORTHO05D006799 2.6e-10 68.2 60 55.0
Sc05g0001060 Simmondsia chinensis HOM05D005044 ORTHO05D006799 2.6e-10 68.2 62 59.7
GSVIVG01000712001 Vitis vinifera HOM05D005044 ORTHO05D006799 2.6e-10 68.2 62 56.5
MSTRG.17471 Avicennia marina HOM05D005044 ORTHO05D006799 3.4e-10 67.8 61 59.0
Eucgr.K03317 Eucalyptus grandis HOM05D005044 ORTHO05D006799 5.8e-10 67.0 63 57.1
Lsat_1_v5_gn_9_8160 Lactuca sativa HOM05D005044 ORTHO05D006799 5.8e-10 67.0 62 54.8
Potri.002G045900 Populus trichocarpa HOM05D005044 ORTHO05D006799 5.8e-10 67.0 55 60.0
Eucgr.K03316 Eucalyptus grandis HOM05D005044 ORTHO05D006799 7.5e-10 66.6 63 58.7
FAN24G0661 Fragaria x ananassa HOM05D005044 ORTHO05D006799 1.7e-09 65.5 60 58.3
PSO210G1356 Papaver somniferum HOM05D005044 ORTHO05D006799 1.7e-09 65.5 62 54.8
PSO461G0059 Papaver somniferum HOM05D005044 ORTHO05D006799 1.7e-09 65.5 62 54.8
Medtr8g062330 Medicago truncatula HOM05D005044 ORTHO05D006799 2.2e-09 65.1 60 55.0
A04p05170 Brassica napus HOM05D005044 ORTHO05D006799 3.7e-09 64.3 55 52.7
PSO210G5903 Papaver somniferum HOM05D005044 ORTHO05D006799 8.3e-09 63.2 58 55.2
PSO832G0444 Papaver somniferum HOM05D005044 ORTHO05D006799 8.3e-09 63.2 58 55.2
Actinidia30711 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.9e-08 62.0 51 62.7
ATR0665G603 Amborella trichopoda HOM05D005044 ORTHO05D006799 1.9e-08 62.0 62 54.8
CBR_g46433 Chara braunii HOM05D005044 ORTHO05D006799 2.4e-08 61.6 55 54.5
GSVIVG01000713001 Vitis vinifera HOM05D005044 ORTHO05D006799 2.4e-08 61.6 61 55.7
ECA247G2181 Erigeron canadensis HOM05D005044 ORTHO05D006799 3.2e-08 61.2 62 50.0
Pp3c2_9560 Physcomitrium patens HOM05D005044 ORTHO05D006799 4.1e-08 60.8 61 49.2
Aa31sc64G50 Aethionema arabicum HOM05D005044 ORTHO05D006799 1.2e-07 59.3 60 50.0
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 1.2e-07 59.3 33 78.8
Nn1g02531 Nelumbo nucifera HOM05D005044 ORTHO05D006799 1.2e-07 59.3 54 57.4
CDE07G1918 Ceratophyllum demersum HOM05D005044 ORTHO05D006799 1.6e-07 58.9 30 80.0
Mapoly0187s0003 Marchantia polymorpha HOM05D005044 ORTHO05D006799 2.1e-07 58.5 56 51.8
Os10g0415900 Oryza sativa ssp. japonica HOM05D005044 ORTHO05D006799 2.7e-07 58.2 51 58.8
Cc01_g18890 Coffea canephora HOM05D005044 ORTHO05D006799 4.6e-07 57.4 32 78.1
Rhsim01G0270400 Rhododendron simsii HOM05D005044 ORTHO05D006799 4.6e-07 57.4 61 52.5
Rhsim13G0030500 Rhododendron simsii HOM05D005044 ORTHO05D006799 4.6e-07 57.4 30 83.3
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 6.0e-07 57.0 29 86.2
FAN20G1248 Fragaria x ananassa HOM05D005044 ORTHO05D006799 6.0e-07 57.0 30 80.0
FAN27G2477 Fragaria x ananassa HOM05D005044 ORTHO05D006799 6.0e-07 57.0 30 80.0
MBI04_g08415_MAGBIO Magnolia biondii HOM05D005044 ORTHO05D006799 6.0e-07 57.0 28 85.7
SMO367G0544 Selaginella moellendorffii HOM05D005044 ORTHO05D006799 6.0e-07 57.0 28 85.7
Zm00001eb223040 Zea mays HOM05D005044 ORTHO05D006799 6.0e-07 57.0 28 85.7
vmacro14878 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 7.8e-07 56.6 30 80.0
A02p37520 Brassica napus HOM05D005044 ORTHO05D020187 1.0e-06 56.2 32 75.0
Haze_24523 Corylus avellana HOM05D005044 ORTHO05D006799 1.0e-06 56.2 26 92.3
A09p47560 Brassica napus HOM05D005044 ORTHO05D020187 1.7e-06 55.5 29 79.3
BraA09t40212Z Brassica rapa HOM05D005044 ORTHO05D006799 1.7e-06 55.5 29 79.3
vmacro02624 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 3.0e-06 54.7 26 88.5
Sabra05G0166600 Salix brachista HOM05D005044 ORTHO05D006799 3.9e-06 54.3 30 76.7
Sabra02G0036800 Salix brachista HOM05D005044 ORTHO05D006799 5.1e-06 53.9 30 73.3
HPP92_026599 Vanilla planifolia HOM05D005044 ORTHO05D006799 6.6e-06 53.5 25 96.0


User provided reference genes

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