Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023045 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 4.2e-36 154.1 72 100.0
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 3.8e-21 104.4 74 74.3
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 6.5e-13 77.0 79 54.4
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 1.4e-12 75.9 79 54.4
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 1.9e-12 75.5 79 54.4
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 1.2e-11 72.8 82 50.0
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 2.7e-11 71.6 71 54.9
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 1.1e-09 66.2 59 55.9
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 2.5e-09 65.1 72 44.4
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 3.3e-09 64.7 82 41.5
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 3.3e-09 64.7 77 46.8
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 4.3e-09 64.3 79 45.6
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 4.8e-08 60.8 69 47.8
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 1.4e-07 59.3 73 46.6
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 1.4e-07 59.3 68 47.1
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 1.8e-07 58.9 81 43.2
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 1.8e-07 58.9 79 44.3
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 2.4e-07 58.5 78 43.6
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.2e-06 56.2 76 40.8
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.2e-06 56.2 76 40.8
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 1.2e-06 56.2 76 40.8
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 1.2e-06 56.2 80 37.5
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 1.5e-06 55.8 83 42.2
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 2.6e-06 55.1 81 38.3
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 4.5e-06 54.3 78 38.5
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 7.7e-06 53.5 79 38.0


User provided reference genes

Program Settings