Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023038 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.9e-62 242.3 116 100.0
CSS0006887 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 5.1e-52 207.6 116 88.8
CSS0003221 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.2e-48 196.4 116 83.6
CSS0002147 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.9e-45 183.7 116 80.2
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.0e-44 183.3 116 79.3
CSS0015259 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.0e-44 181.8 120 76.7
CSS0023820 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.5e-43 178.7 116 75.9
CSS0004806 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.3e-42 176.4 116 75.9
CSS0010240 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.8e-42 174.5 116 74.1
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.9e-31 138.7 111 60.4
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.8e-31 138.3 111 60.4
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 6.5e-31 137.5 114 58.8
CSS0009299 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.5e-31 137.1 114 58.8
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.5e-30 136.3 114 57.9
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 9.4e-30 133.7 114 54.4
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.0e-28 128.6 115 58.3
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.3e-27 125.2 111 59.5
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.2e-26 120.6 111 57.7
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.1e-25 120.2 111 55.0
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.1e-25 118.2 110 56.4
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 5.3e-25 117.9 116 55.2
CSS0005100 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.5e-24 114.8 111 53.2
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 1.2e-21 106.7 111 45.9
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 8.0e-21 104.0 96 57.3
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 1.0e-20 103.6 102 53.9
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.0e-19 99.4 109 48.6
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 1.7e-18 96.3 96 55.2
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 2.2e-18 95.9 93 52.7
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.8e-18 95.5 111 45.9
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 8.3e-18 94.0 96 54.2
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 1.8e-17 92.8 111 43.2
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 1.8e-17 92.8 111 43.2
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.1e-17 92.0 109 46.8
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 7.0e-17 90.9 97 50.5
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.6e-16 89.7 116 42.2
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.6e-16 89.7 116 42.2
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 3.5e-16 88.6 111 44.1
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 4.5e-16 88.2 107 43.9
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 5.9e-16 87.8 111 44.1
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 7.7e-16 87.4 96 49.0
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 5.0e-15 84.7 99 45.5
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.5e-14 82.4 95 46.3
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 1.2e-13 80.1 119 42.9
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.7e-13 78.2 96 42.7
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 1.0e-12 77.0 108 38.9
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-12 76.6 97 43.3
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-12 76.6 97 43.3
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.3e-12 75.9 96 41.7
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-12 75.5 96 39.6
RcHm_v2.0_Chr7g0206281 Rosa chinensis HOM05D000593 ORTHO05D002268 6.8e-12 74.3 85 49.4
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.8e-12 73.9 96 36.5
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.5e-11 73.2 113 32.7
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 2.0e-11 72.8 55 61.8
TWI75G1634 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 2.6e-11 72.4 112 32.1
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.5e-11 70.9 113 34.5
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-10 70.1 110 34.5
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 1.7e-10 69.7 66 54.5
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.8e-10 68.9 115 35.7
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.8e-10 68.9 113 31.0
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 3.7e-10 68.6 101 39.6
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.7e-10 68.6 113 33.6
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.7e-10 68.6 113 33.6
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 1.4e-09 66.6 107 37.4
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.4e-09 66.6 107 37.4
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.4e-09 66.6 111 37.8
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.1e-09 65.5 69 49.3
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.1e-09 65.1 96 37.5
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 5.4e-09 64.7 115 34.8
TWI12G0364 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 5.4e-09 64.7 88 40.9
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 7.0e-09 64.3 115 33.9
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 9.1e-09 63.9 115 34.8
Oeu064531.1 Olea europaea HOM05D000593 ORTHO05D002268 9.1e-09 63.9 57 54.4
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-08 63.2 95 38.9
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 2.7e-08 62.4 99 40.4
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.7e-08 62.4 95 38.9
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.5e-08 62.0 116 34.5
Oeu028054.1 Olea europaea HOM05D000593 ORTHO05D002268 3.5e-08 62.0 59 49.2
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 5.9e-08 61.2 97 41.2
TWI32G0254 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 5.9e-08 61.2 96 33.3
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.0e-07 60.5 96 39.6
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.0e-07 60.5 95 38.9
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 2.3e-07 59.3 55 54.5
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.3e-07 59.3 95 37.9
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 2.9e-07 58.9 125 36.8
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 3.8e-07 58.5 126 37.3
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 5.0e-07 58.2 101 32.7
TWI75G0109 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 5.0e-07 58.2 95 35.8
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 8.6e-07 57.4 56 53.6
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 8.6e-07 57.4 56 51.8
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 8.6e-07 57.4 57 49.1
TWI23G0100 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 8.6e-07 57.4 95 38.9
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 8.6e-07 57.4 99 41.4
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 8.6e-07 57.4 99 41.4
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.1e-06 57.0 115 33.9
TWI63G0981 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.5e-06 56.6 113 30.1
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.9e-06 56.2 102 34.3
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 1.9e-06 56.2 101 32.7
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 1.9e-06 56.2 101 32.7
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.5e-06 55.8 57 52.6
TWI31G0531 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.5e-06 55.8 104 39.4
TWI81G0406 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.5e-06 55.8 95 37.9
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 5.5e-06 54.7 96 38.5
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 5.5e-06 54.7 95 35.8
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 7.2e-06 54.3 96 38.5
FvH4_6g38841 Fragaria vesca HOM05D003216 ORTHO05D002268 7.2e-06 54.3 58 48.3
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 9.5e-06 53.9 96 35.4
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 9.5e-06 53.9 96 35.4
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 9.5e-06 53.9 61 50.8
TWI31G0510 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 9.5e-06 53.9 56 53.6
TWI38G1252 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 9.5e-06 53.9 95 35.8


User provided reference genes

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