Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 5.7e-118 427.6 209 100.0
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 3.3e-81 305.4 216 71.3
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.8e-79 299.7 206 74.8
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.6e-78 295.8 205 72.7
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.6e-78 295.8 205 72.7
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.6e-78 295.8 205 72.7
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.5e-62 243.4 186 66.7
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.3e-34 149.8 169 47.3
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 8.1e-32 141.4 164 43.9
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.8e-31 140.2 168 43.5
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.0e-31 139.0 152 48.0
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.0e-30 136.7 184 38.0
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.0e-30 136.7 188 37.2
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.1e-28 128.3 188 38.8
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-26 124.0 213 38.0
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.8e-26 123.6 200 37.5
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.1e-26 122.1 185 40.0
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.4e-25 118.2 156 37.8
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 1.1e-23 114.4 159 40.9
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 9.0e-23 111.3 158 41.1
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 7.6e-22 108.2 193 37.8
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 8.4e-21 104.8 133 39.8
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.9e-20 103.6 167 34.7
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.3e-20 101.3 151 39.1
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.3e-20 101.3 151 39.1
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-14 84.0 158 30.4
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 5.8e-14 82.0 224 29.0
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.0e-13 81.3 189 31.2
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.3e-13 80.9 120 32.5
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-13 79.0 144 37.5
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 6.5e-13 78.6 142 31.0
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.4e-12 77.4 189 31.7
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.2e-12 76.3 160 30.0
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 3.5e-11 72.8 162 30.9
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.5e-11 72.8 160 29.4
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 4.6e-11 72.4 159 30.2
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.1e-11 72.0 127 37.0
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.1e-11 72.0 67 47.8
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.9e-11 71.6 94 42.6
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.3e-10 70.9 94 41.5
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.0e-10 69.7 191 28.8
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.0e-10 69.7 193 27.5
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 3.0e-10 69.7 96 39.6
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.9e-10 69.3 125 38.4
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.7e-10 68.6 149 29.5
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-09 67.4 131 37.4
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.5e-09 66.6 73 43.8
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-08 64.3 142 27.5
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-08 64.3 142 27.5
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-08 63.2 143 27.3
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-08 62.8 142 26.8
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 8.2e-08 61.6 95 35.8
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-07 60.8 114 33.3
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-07 60.8 142 26.8
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.8e-07 60.5 221 28.1
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 3.1e-07 59.7 133 30.1
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.1e-07 59.3 166 28.9
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.0e-07 58.2 191 24.6
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.2e-06 57.8 106 31.1
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.5e-06 55.8 214 27.1
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-06 55.8 83 36.1
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.9e-06 55.5 143 25.2
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.7e-06 55.1 221 26.7
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-05 54.7 146 24.7
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 1.0e-05 54.7 146 25.3


User provided reference genes

Program Settings