Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 3.5e-186 654.8 332 100.0
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 6.5e-116 421.4 303 71.3
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 2.4e-110 402.9 305 68.9
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 5.9e-109 398.3 268 71.6
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.7e-108 396.7 364 60.4
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 9.1e-102 374.4 285 66.3
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 2.0e-101 373.2 287 66.6
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 2.5e-99 366.3 278 67.3
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 4.2e-99 365.5 293 61.4
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 4.2e-99 365.5 286 65.0
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 1.2e-98 364.0 287 64.5
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 2.3e-97 359.8 265 65.7
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.1e-96 357.5 289 61.9
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.5e-96 357.1 397 52.6
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 5.7e-96 355.1 281 61.9
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 7.4e-96 354.8 296 59.1
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 1.3e-95 354.0 265 66.8
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.2e-95 353.2 275 65.8
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 6.3e-95 351.7 270 64.4
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 6.3e-95 351.7 284 61.3
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 8.2e-95 351.3 286 60.1
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 1.1e-94 350.9 260 66.5
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 1.8e-94 350.1 260 64.2
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 1.8e-94 350.1 302 60.6
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 4.1e-94 349.0 271 62.7
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 5.3e-94 348.6 257 66.1
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 9.1e-94 347.8 222 74.3
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 9.1e-94 347.8 284 61.3
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 9.1e-94 347.8 271 63.1
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 1.5e-93 347.1 328 55.5
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 4.5e-93 345.5 257 66.5
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 4.5e-93 345.5 278 60.8
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 5.9e-93 345.1 285 60.7
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 1.0e-92 344.4 268 62.7
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 2.2e-92 343.2 287 61.0
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 8.5e-92 341.3 259 64.5
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 2.5e-91 339.7 289 59.5
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 7.2e-91 338.2 275 60.4
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 2.1e-90 336.7 259 63.7
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 4.7e-90 335.5 254 65.7
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 6.1e-90 335.1 263 63.5
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 1.8e-89 333.6 287 58.2
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 2.3e-89 333.2 219 70.8
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 3.0e-89 332.8 255 64.3
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 3.0e-89 332.8 219 69.9
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 3.9e-89 332.4 219 69.9
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 3.9e-89 332.4 252 65.9
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 5.2e-89 332.0 259 62.9
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 5.2e-89 332.0 234 66.7
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 6.7e-89 331.6 258 64.0
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 8.8e-89 331.3 305 56.4
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 1.1e-88 330.9 298 57.7
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 2.6e-88 329.7 261 63.2
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 3.3e-88 329.3 262 60.3
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 4.4e-88 328.9 266 59.4
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 5.7e-88 328.6 291 56.7
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 5.7e-88 328.6 284 58.8
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 7.4e-88 328.2 310 56.5
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 9.7e-88 327.8 317 55.5
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 9.7e-88 327.8 310 57.4
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 9.7e-88 327.8 263 59.7
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 2.8e-87 326.2 256 63.3
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 3.7e-87 325.9 257 60.3
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 1.4e-86 323.9 324 53.1
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 1.2e-85 320.9 276 60.5
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 1.2e-85 320.9 316 54.1
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 2.6e-85 319.7 289 55.4
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 3.5e-85 319.3 222 70.7
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 4.2e-83 312.4 258 59.7
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 1.6e-82 310.5 259 58.3
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 3.6e-82 309.3 370 48.1
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 8.0e-82 308.1 357 48.5
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 2.3e-81 306.6 304 53.9
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 2.3e-81 306.6 224 66.1
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 4.0e-81 305.8 277 56.7
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 5.2e-81 305.4 304 53.9
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 9.7e-80 301.2 257 54.5
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 1.7e-79 300.4 215 66.5
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 3.7e-79 299.3 256 55.5
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 4.8e-79 298.9 278 54.0
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 2.4e-78 296.6 303 51.8
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.1e-78 296.2 285 53.3
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 4.1e-78 295.8 258 57.8
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 5.3e-78 295.4 284 53.5
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 7.0e-78 295.0 270 54.1
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 7.0e-78 295.0 271 53.9
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 1.6e-77 293.9 271 53.9
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 1.6e-77 293.9 259 55.6
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 2.0e-77 293.5 269 53.9
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 2.7e-77 293.1 271 53.9
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.7e-77 293.1 295 51.9
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 7.7e-77 291.6 281 52.0
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 7.7e-77 291.6 290 53.1
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.0e-76 291.2 284 52.1
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.7e-76 290.4 267 54.3
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 5.0e-76 288.9 286 54.9
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 6.5e-76 288.5 291 50.2
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 1.1e-75 287.7 281 51.2
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 2.5e-75 286.6 293 50.5
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 2.5e-75 286.6 293 50.5
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 4.2e-75 285.8 264 54.2
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 5.5e-75 285.4 164 87.2
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 9.4e-75 284.6 280 52.5
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.2e-74 284.3 262 53.4
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 2.7e-74 283.1 278 52.5
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 2.7e-74 283.1 276 51.4
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 4.7e-74 282.3 245 55.5
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 4.7e-74 282.3 262 53.4
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 6.1e-74 282.0 280 48.9
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 5.2e-73 278.9 279 51.6
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 6.8e-73 278.5 221 61.1
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 1.3e-71 274.2 222 62.6
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 1.7e-71 273.9 259 53.3
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 2.2e-71 273.5 282 51.8
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 1.4e-70 270.8 256 53.1
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 3.1e-70 269.6 241 54.8
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 7.0e-70 268.5 272 50.0
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 2.0e-69 266.9 281 48.8
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 4.5e-69 265.8 259 53.7
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 1.9e-67 260.4 221 57.5
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 2.8e-66 256.5 198 66.2
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 1.0e-65 254.6 198 64.6
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 5.7e-64 248.8 254 51.6
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 7.5e-64 248.4 200 61.0
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 9.2e-62 241.5 174 66.7
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 4.5e-61 239.2 255 48.6
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 1.8e-57 227.3 218 53.7
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 2.3e-57 226.9 173 61.8
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 3.0e-57 226.5 214 53.3
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.7e-55 220.7 216 53.7
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 1.7e-55 220.7 215 53.0
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 8.3e-55 218.4 215 52.1
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 8.3e-55 218.4 214 52.8
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 1.1e-54 218.0 215 50.7
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 2.4e-54 216.9 215 51.2
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 3.2e-54 216.5 215 51.2
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 1.6e-53 214.2 215 50.7
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 2.0e-53 213.8 207 52.7
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 7.8e-53 211.8 257 46.7
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 3.0e-52 209.9 167 62.3
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 3.4e-48 196.4 198 47.5
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 9.8e-48 194.9 231 46.3
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 7.0e-46 188.7 136 68.4
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 4.3e-43 179.5 140 62.9
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 5.6e-43 179.1 124 71.0
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 6.2e-42 175.6 166 51.8
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.4e-41 174.5 237 42.6
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 2.3e-36 157.1 131 61.1
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 7.3e-35 152.1 262 36.3
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 1.2e-34 151.4 117 65.0
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 1.6e-34 151.0 144 56.9
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 2.1e-34 150.6 133 57.9
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 6.8e-33 145.6 120 62.5
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 3.4e-32 143.3 120 61.7
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 3.4e-32 143.3 242 37.6
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 5.8e-32 142.5 84 85.7
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 7.6e-32 142.1 77 89.6
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 7.6e-32 142.1 166 44.6
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 2.7e-29 133.7 197 39.1
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 4.6e-29 132.9 149 47.0
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 1.5e-27 127.9 187 41.2
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 9.9e-24 115.2 251 32.7
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 4.2e-22 109.8 109 55.0
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 3.9e-20 103.2 88 53.4
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 3.3e-19 100.1 84 53.6
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 1.7e-15 87.8 85 52.9
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 7.9e-13 79.0 182 36.8
AagrBONN_evm.TU.Sc2ySwM_368.1265 Anthoceros agrestis HOM05D019459 ORTHO05D019626 5.1e-12 76.3 185 35.7
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 3.7e-10 70.1 76 46.1
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 8.1e-10 68.9 59 57.6
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 3.1e-09 67.0 151 33.1
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 1.2e-08 65.1 165 30.3
Mapoly0068s0103 Marchantia polymorpha HOM05D019459 ORTHO05D019626 1.5e-08 64.7 183 31.7
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 1.3e-07 61.6 139 32.4


User provided reference genes

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