Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022990 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 5.1e-84 314.3 152 100.0
CSS0001478 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 3.1e-65 251.9 152 83.6
CSS0019124 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 9.3e-62 240.4 152 80.9
CSS0006524 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 7.4e-59 230.7 156 76.9
CSS0007484 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 7.4e-59 230.7 156 76.9
CSS0045262 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D017715 6.9e-57 224.2 156 75.6
CSS0012670 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.3e-47 193.4 156 67.9
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 3.6e-21 105.5 184 40.8
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 2.0e-19 99.8 182 40.7
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 2.0e-19 99.8 182 40.7
CSS0037245 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.3e-15 87.0 176 37.5
Rhsim06G0161400 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-15 86.7 143 41.3
CSS0029815 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.9e-15 85.9 176 35.8
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 2.9e-15 85.9 195 37.4
CSS0050384 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.6e-15 84.7 176 35.8
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-14 84.0 188 35.1
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-14 84.0 195 35.4
Rhsim06G0161900 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.2e-13 80.5 96 50.0
Actinidia16423 Actinidia chinensis HOM05D000092 ORTHO05D000042 6.1e-13 78.2 170 34.1
Actinidia20282 Actinidia chinensis HOM05D000092 ORTHO05D000042 6.1e-13 78.2 173 32.4
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 8.0e-13 77.8 178 36.0
Rhsim03G0020800 Rhododendron simsii HOM05D000092 ORTHO05D000042 8.0e-13 77.8 178 32.6
Rhsim06G0161600 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.8e-12 76.6 142 38.0
Rhsim03G0023800 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.0e-12 75.9 179 31.3
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.4e-11 72.4 174 35.6
vmacro12194 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 9.8e-11 70.9 125 40.8
Rhsim03G0016800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-10 70.1 97 44.3
Actinidia36927 Actinidia chinensis HOM05D000092 ORTHO05D000042 2.2e-10 69.7 173 33.5
Rhsim06G0161800 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.7e-10 68.9 139 38.1
vmacro09389 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 3.7e-10 68.9 133 33.8
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 4.9e-10 68.6 103 41.7
CSS0006875 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.4e-10 68.2 146 33.6
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 8.3e-10 67.8 90 45.6
Rhsim05G0218900 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.8e-09 66.6 171 35.7
CSS0034659 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.4e-09 66.2 142 32.4
vmacro07866 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 3.2e-09 65.9 152 36.2
CSS0009386 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.1e-09 65.5 177 31.6
vmacro09387 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.2e-08 63.9 151 33.1
Rhsim05G0218300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.6e-08 63.5 165 30.3
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 2.7e-08 62.8 98 45.9
Rhsim03G0017100 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.6e-08 62.0 214 30.8
Rhsim03G0035100 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.6e-08 62.0 182 28.0
vmacro07864 Vaccinium macrocarpon HOM05D000092 ORTHO05D017715 5.9e-08 61.6 161 34.2
Atru.chr1.2689_Atru.chr1.2685 Acer truncatum HOM05D000092 ORTHO05D000042 1.0e-07 60.8 148 35.1
Actinidia12451 Actinidia chinensis HOM05D000092 ORTHO05D000042 1.0e-07 60.8 171 31.0
Actinidia38260 Actinidia chinensis HOM05D000092 ORTHO05D021096 1.7e-07 60.1 172 33.1
Dinv02211 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-07 60.1 183 30.6
vmacro23451 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 2.3e-07 59.7 99 38.4
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 3.0e-07 59.3 103 39.8
Rhsim05G0218700 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.0e-07 59.3 184 28.3
Dinv07591 Davidia involucrata HOM05D000092 ORTHO05D000042 3.9e-07 58.9 183 30.6
Rhsim05G0217600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.9e-07 58.9 97 38.1
RhsimUnG0106500 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.9e-07 58.9 97 38.1
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 5.0e-07 58.5 266 25.9
Actinidia24801 Actinidia chinensis HOM05D000092 ORTHO05D021096 8.6e-07 57.8 123 34.1
Rhsim02G0094400 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.1e-06 57.4 149 32.2
Dinv10941 Davidia involucrata HOM05D000092 ORTHO05D000042 1.5e-06 57.0 196 29.6
RhsimUnG0106800 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.9e-06 56.6 97 38.1
vmacro22901 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 2.5e-06 56.2 159 34.0
Actinidia37006 Actinidia chinensis HOM05D000092 ORTHO05D000042 3.3e-06 55.8 141 29.1
Rhsim03G0017300 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.3e-06 55.5 136 32.4
VMungo0540G0543 Vigna mungo HOM05D000092 ORTHO05D000042 5.6e-06 55.1 128 33.6
Dinv20558 Davidia involucrata HOM05D000092 ORTHO05D000042 7.3e-06 54.7 85 43.5
Dinv20738 Davidia involucrata HOM05D000092 ORTHO05D000042 7.3e-06 54.7 85 43.5
Glyma.13G260600 Glycine max HOM05D000092 ORTHO05D000042 7.3e-06 54.7 132 33.3
Rhsim03G0014300 Rhododendron simsii HOM05D000092 ORTHO05D000042 7.3e-06 54.7 97 38.1
vmacro07639 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 7.3e-06 54.7 134 27.6
RhsimUnG0150300 Rhododendron simsii HOM05D000092 ORTHO05D000042 9.5e-06 54.3 97 37.1
Thecc.05G202900 Theobroma cacao HOM05D000092 ORTHO05D000042 9.5e-06 54.3 154 29.9


User provided reference genes

Program Settings