Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 9.4e-182 640.2 353 100.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 8.0e-157 557.4 347 90.8
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 4.5e-107 392.1 372 69.1
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.2e-106 389.8 368 70.4
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 4.6e-104 382.1 354 67.5
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.4e-100 369.8 369 65.9
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 9.0e-100 367.9 369 65.6
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 7.4e-86 321.6 354 59.9
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.7e-82 310.5 426 53.1
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 2.9e-82 309.7 364 59.3
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 3.0e-79 299.7 315 64.4
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 6.7e-79 298.5 363 56.7
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 2.0e-75 287.0 383 55.4
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 5.2e-71 272.3 368 55.4
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 6.7e-71 271.9 364 55.2
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 3.3e-70 269.6 369 52.8
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 7.4e-70 268.5 367 54.0
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 9.7e-70 268.1 363 55.4
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 4.8e-69 265.8 450 46.9
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 8.2e-69 265.0 358 53.1
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 1.1e-68 264.6 377 52.5
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 7.0e-68 261.9 349 52.4
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 5.9e-67 258.8 363 51.5
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 2.2e-66 256.9 346 55.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.8e-66 256.1 368 52.7
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 8.5e-66 255.0 316 56.0
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.1e-65 254.6 364 53.0
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.9e-65 253.8 228 61.8
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.5e-65 253.4 365 51.8
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.0e-63 248.1 369 50.7
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 1.4e-63 247.7 353 50.7
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.3e-63 246.9 319 55.5
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 3.0e-63 246.5 332 53.6
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 8.8e-63 245.0 192 66.7
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.2e-62 244.6 353 51.3
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.5e-62 244.2 378 50.8
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 4.4e-62 242.7 365 51.2
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.3e-61 241.1 373 50.4
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 6.3e-61 238.8 373 50.1
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.8e-60 237.3 376 50.0
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 2.0e-59 233.8 373 49.6
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.7e-59 233.4 321 51.7
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.5e-59 233.0 373 46.9
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 7.7e-59 231.9 357 52.1
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.3e-58 231.1 375 46.9
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 8.5e-58 228.4 163 74.2
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.5e-57 227.6 368 46.7
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 1.9e-57 227.3 338 50.6
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 2.5e-57 226.9 370 48.1
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 4.2e-57 226.1 379 48.5
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.2e-56 224.6 367 49.0
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.6e-56 224.2 368 48.4
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 2.1e-56 223.8 334 50.6
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.7e-56 223.4 373 48.3
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 6.1e-56 222.2 367 48.2
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 2.3e-55 220.3 369 48.2
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 4.0e-55 219.5 381 48.6
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.5e-54 217.6 379 48.5
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 2.0e-54 217.2 364 48.4
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.0e-54 217.2 303 53.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 2.6e-54 216.9 378 46.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 9.8e-54 214.9 369 48.2
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 2.8e-53 213.4 249 51.4
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 2.8e-53 213.4 353 49.9
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 4.8e-53 212.6 354 49.7
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.1e-52 211.5 347 46.1
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 3.1e-52 209.9 361 49.3
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 5.4e-52 209.1 359 46.5
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 7.0e-52 208.8 369 47.7
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.2e-51 208.0 372 46.2
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.2e-51 208.0 391 46.0
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.2e-51 208.0 382 45.5
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.6e-51 207.6 267 49.1
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 5.9e-51 205.7 245 52.2
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 5.9e-51 205.7 254 51.2
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.0e-50 204.9 251 50.2
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.0e-50 204.9 265 49.8
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.0e-50 204.9 345 48.1
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.5e-49 200.3 369 46.3
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 2.5e-49 200.3 369 46.3
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 4.2e-49 199.5 369 46.1
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 7.2e-49 198.7 161 61.5
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 6.1e-48 195.7 363 46.0
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.4e-47 194.5 178 60.1
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 2.0e-46 190.7 180 55.0
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.4e-46 189.5 375 44.3
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.2e-45 187.2 302 42.4
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.8e-45 186.8 380 43.7
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 6.3e-45 185.7 280 42.5
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.1e-44 184.9 369 45.3
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 2.4e-44 183.7 374 43.0
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.7e-43 180.3 321 44.9
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 2.3e-42 177.2 320 45.0
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.9e-42 176.8 305 46.6
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 6.6e-42 175.6 335 43.3
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 3.3e-41 173.3 160 58.8
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 5.6e-41 172.6 312 45.5
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 7.3e-41 172.2 246 45.1
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 3.6e-40 169.9 316 43.0
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.3e-39 167.2 177 52.5
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 5.2e-39 166.0 257 40.9
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 5.2e-39 166.0 344 41.6
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 8.9e-39 165.2 256 43.8
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.1e-36 158.3 194 49.0
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.1e-31 141.7 265 46.8
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 1.8e-31 141.0 184 44.0
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.1e-28 131.7 250 36.8
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 3.0e-26 123.6 194 42.3
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.9e-26 123.2 197 38.6
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 2.5e-25 120.6 188 39.9
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 3.6e-24 116.7 203 36.0
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.8e-23 114.4 128 54.7
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 3.5e-19 100.1 184 50.0
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.9e-17 94.4 61 78.7
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 7.3e-17 92.4 78 64.1
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 9.0e-07 58.9 141 33.3
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 7.6e-06 55.8 148 30.4


User provided reference genes

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