Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022924 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 3.9e-31 137.5 69 100.0
CSS0027906 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 4.7e-29 130.6 65 100.0
Manes.09G020100 Manihot esculenta HOM05D001499 ORTHO05D001560 3.1e-28 127.9 65 96.9
Nn7g36317 Nelumbo nucifera HOM05D001499 ORTHO05D001560 3.1e-28 127.9 65 96.9
Rhsim03G0027400 Rhododendron simsii HOM05D001499 ORTHO05D001560 3.1e-28 127.9 65 96.9
Lju124C43T7 Lonicera japonica HOM05D001499 ORTHO05D001560 4.0e-28 127.5 65 95.4
SGA_v2.0_scaffold273G46435 Striga asiatica HOM05D001499 ORTHO05D001560 4.0e-28 127.5 65 95.4
SGA_v2.0_scaffold94G28488 Striga asiatica HOM05D001499 ORTHO05D001560 5.2e-28 127.1 65 95.4
vmacro07834 Vaccinium macrocarpon HOM05D001499 ORTHO05D001560 5.2e-28 127.1 65 95.4
Lalb_Chr25g0287171 Lupinus albus HOM05D001499 ORTHO05D001560 6.8e-28 126.7 65 92.3
Gohir.D03G069600 Gossypium hirsutum HOM05D001499 ORTHO05D001560 8.9e-28 126.3 65 93.8
Gorai.003G091100 Gossypium raimondii HOM05D001499 ORTHO05D001560 8.9e-28 126.3 65 93.8
Oeu008164.1 Olea europaea HOM05D001499 ORTHO05D001560 8.9e-28 126.3 65 95.4
Potri.006G049100 Populus trichocarpa HOM05D001499 ORTHO05D001560 8.9e-28 126.3 65 95.4
Actinidia39215 Actinidia chinensis HOM05D001499 ORTHO05D001560 1.5e-27 125.6 65 92.3
Cpa.g.sc967.2 Carica papaya HOM05D001499 ORTHO05D001560 1.5e-27 125.6 65 95.4
CSS0040554 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 2.6e-27 124.8 65 93.8
CiPaw.09G039100 Carya illinoinensis HOM05D001499 ORTHO05D001560 2.6e-27 124.8 65 93.8
TAR633G1315 Trochodendron aralioides HOM05D001499 ORTHO05D001560 2.6e-27 124.8 65 90.8
Cfa016805 Carpinus fangiana HOM05D001499 ORTHO05D001560 3.4e-27 124.4 65 93.8
COL.COLO4_04401 Corchorus olitorius HOM05D001499 ORTHO05D001560 3.4e-27 124.4 65 93.8
Duzib106G0340 Durio zibethinus HOM05D001499 ORTHO05D001560 3.4e-27 124.4 65 93.8
Glyma.10G113100 Glycine max HOM05D001499 ORTHO05D001560 3.4e-27 124.4 65 92.3
Thecc.05G149400 Theobroma cacao HOM05D001499 ORTHO05D001560 3.4e-27 124.4 65 92.3
ATR0320G039 Amborella trichopoda HOM05D001499 ORTHO05D001560 4.4e-27 124.0 65 92.3
Ciclev10004686m.g Citrus clementina HOM05D001499 ORTHO05D001560 4.4e-27 124.0 65 92.3
Dinv39621 Davidia involucrata HOM05D001499 ORTHO05D001560 4.4e-27 124.0 65 93.8
HanXRQChr13g0396471 Helianthus annuus HOM05D001499 ORTHO05D001560 4.4e-27 124.0 65 90.8
Actinidia22801 Actinidia chinensis HOM05D001499 ORTHO05D001560 5.8e-27 123.6 65 90.8
CSS0008595 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 5.8e-27 123.6 65 92.3
Haze_19836 Corylus avellana HOM05D001499 ORTHO05D001560 5.8e-27 123.6 65 92.3
Manes.08G051700 Manihot esculenta HOM05D001499 ORTHO05D001560 5.8e-27 123.6 65 93.8
TAR636G3397 Trochodendron aralioides HOM05D001499 ORTHO05D001560 5.8e-27 123.6 65 90.8
Dinv17969 Davidia involucrata HOM05D001499 ORTHO05D001560 7.6e-27 123.2 65 92.3
SalBow6G6755 Salvia bowleyana HOM05D001499 ORTHO05D001560 7.6e-27 123.2 65 92.3
Atru.chr1.1126 Acer truncatum HOM05D001499 ORTHO05D001560 1.3e-26 122.5 65 92.3
Aqoxy2G00225 Aquilegia oxysepala HOM05D001499 ORTHO05D001560 1.3e-26 122.5 65 92.3
DCAR_020497 Daucus carota HOM05D001499 ORTHO05D001560 1.3e-26 122.5 65 89.2
Prupe.7G056500 Prunus persica HOM05D001499 ORTHO05D001560 1.3e-26 122.5 65 89.2
TWI77G0056 Tripterygium wilfordii HOM05D001499 ORTHO05D001560 1.3e-26 122.5 65 92.3
VMungo0720G2024 Vigna mungo HOM05D001499 ORTHO05D001560 1.7e-26 122.1 65 89.2
CiPaw.10G034300 Carya illinoinensis HOM05D001499 ORTHO05D001560 2.2e-26 121.7 65 90.8
DCAR_009067 Daucus carota HOM05D001499 ORTHO05D001560 2.2e-26 121.7 65 89.2
Lalb_Chr20g0110561 Lupinus albus HOM05D001499 ORTHO05D001560 2.2e-26 121.7 65 86.2
THA.LOC104802064 Tarenaya hassleriana HOM05D001499 ORTHO05D001560 2.2e-26 121.7 65 92.3
GSVIVG01033256001 Vitis vinifera HOM05D001499 ORTHO05D001560 2.2e-26 121.7 65 89.2
arahy.Tifrunner.gnm1.ann1.GI5ZH0 Arachis hypogaea HOM05D001499 ORTHO05D001560 2.9e-26 121.3 65 89.2
arahy.Tifrunner.gnm1.ann1.K81J42 Arachis hypogaea HOM05D001499 ORTHO05D001560 2.9e-26 121.3 65 89.2
CANSAT80G2713 Cannabis sativa HOM05D001499 ORTHO05D001560 2.9e-26 121.3 65 92.3
Ca_10365_v3 Cicer arietinum L. HOM05D001499 ORTHO05D001560 2.9e-26 121.3 63 90.5
THA.LOC104824434 Tarenaya hassleriana HOM05D001499 ORTHO05D001560 2.9e-26 121.3 65 90.8
ECA248G2226 Erigeron canadensis HOM05D001499 ORTHO05D001560 3.8e-26 120.9 65 89.2
Lsat_1_v5_gn_5_161241 Lactuca sativa HOM05D001499 ORTHO05D001560 3.8e-26 120.9 63 90.5
Eucgr.A02337 Eucalyptus grandis HOM05D001499 ORTHO05D001560 4.9e-26 120.6 65 90.8
Medtr1g053160 Medicago truncatula HOM05D001499 ORTHO05D001560 4.9e-26 120.6 63 92.1
Ah.04g151570 Amaranthus hybridus HOM05D001499 ORTHO05D001560 6.4e-26 120.2 65 87.7
Nitab4.5_0000364g0080 Nicotiana tabacum HOM05D001499 ORTHO05D001560 6.4e-26 120.2 65 90.8
Nitab4.5_0003307g0080 Nicotiana tabacum HOM05D001499 ORTHO05D001560 6.4e-26 120.2 65 90.8
PGR004G0169 Punica granatum HOM05D001499 ORTHO05D001560 6.4e-26 120.2 65 90.8
AL4G39980 Arabidopsis lyrata HOM05D001499 ORTHO05D001560 8.4e-26 119.8 65 89.2
AT2G41680 Arabidopsis thaliana HOM05D001499 ORTHO05D001560 8.4e-26 119.8 65 89.2
A03p23360 Brassica napus HOM05D001499 ORTHO05D001560 8.4e-26 119.8 65 89.2
BraA03t11553Z Brassica rapa HOM05D001499 ORTHO05D001560 8.4e-26 119.8 65 89.2
Hund19144 Selenicereus undatus HOM05D001499 ORTHO05D001560 8.4e-26 119.8 65 89.2
A05p02410 Brassica napus HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 90.8
C04p02860 Brassica napus HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 90.8
BolC4t21926H Brassica oleracea HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 90.8
FvH4_6g24270 Fragaria vesca HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 89.2
FAN02G2115 Fragaria x ananassa HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 89.2
FAN05G4798 Fragaria x ananassa HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 89.2
FAN09G3104 Fragaria x ananassa HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 89.2
PSO339G1573 Papaver somniferum HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 87.7
PSO384G4106 Papaver somniferum HOM05D001499 ORTHO05D001560 1.1e-25 119.4 65 87.7
Carub.0004s2395 Capsella rubella HOM05D001499 ORTHO05D001560 1.4e-25 119.0 65 89.2
Thhalv10016520m.g Eutrema salsugineum HOM05D001499 ORTHO05D001560 1.4e-25 119.0 65 89.2
Sp4g23920 Schrenkiella parvula HOM05D001499 ORTHO05D001560 1.4e-25 119.0 65 89.2
HPP92_025058 Vanilla planifolia HOM05D001499 ORTHO05D001560 1.4e-25 119.0 66 89.4
CAN.G128.7 Capsicum annuum HOM05D001499 ORTHO05D001560 1.9e-25 118.6 65 89.2
Lj5g0024774 Lotus japonicus HOM05D001499 ORTHO05D001560 1.9e-25 118.6 65 87.7
MD00G1191800 Malus domestica HOM05D001499 ORTHO05D001560 1.9e-25 118.6 65 87.7
Psat6g120920 Pisum sativum HOM05D001499 ORTHO05D001560 1.9e-25 118.6 62 91.9
Solyc10g080080.3 Solanum lycopersicum HOM05D001499 ORTHO05D001560 1.9e-25 118.6 65 89.2
Sopen10g030690 Solanum pennellii HOM05D001499 ORTHO05D001560 1.9e-25 118.6 65 89.2
Hma1.2p1_1280F.1_g272530 Hydrangea macrophylla HOM05D001499 ORTHO05D001560 3.2e-25 117.9 65 89.2
Actinidia09316 Actinidia chinensis HOM05D001499 ORTHO05D001560 4.1e-25 117.5 64 85.9
BcaC02g12788 Brassica carinata HOM05D001499 ORTHO05D001560 4.1e-25 117.5 64 90.6
BraA05t19235Z Brassica rapa HOM05D001499 ORTHO05D001560 4.1e-25 117.5 64 90.6
CARHR136760 Cardamine hirsuta HOM05D001499 ORTHO05D001560 4.1e-25 117.5 64 87.5
AUR62026055 Chenopodium quinoa HOM05D001499 ORTHO05D001560 4.1e-25 117.5 65 87.7
Migut.J01745 Erythranthe guttata HOM05D001499 ORTHO05D001560 4.1e-25 117.5 65 87.7
FAN14G3970 Fragaria x ananassa HOM05D001499 ORTHO05D001560 4.1e-25 117.5 64 89.1
Peaxi162Scf00109g00516 Petunia axillaris HOM05D001499 ORTHO05D001560 4.1e-25 117.5 65 86.2
Zm00001eb329630 Zea mays HOM05D001499 ORTHO05D001560 4.1e-25 117.5 65 90.8
Phvul.007G251800 Phaseolus vulgaris HOM05D001499 ORTHO05D001560 5.4e-25 117.1 65 86.2
RcHm_v2.0_Chr3g0482921 Rosa chinensis HOM05D001499 ORTHO05D001560 5.4e-25 117.1 65 86.2
Sabra06G0034400 Salix brachista HOM05D001499 ORTHO05D001560 5.4e-25 117.1 65 89.2
TPR.G29104 Trifolium pratense HOM05D001499 ORTHO05D001560 7.1e-25 116.7 63 88.9
BcaC01g05324 Brassica carinata HOM05D001499 ORTHO05D001560 1.2e-24 115.9 63 87.3
C03p27880 Brassica napus HOM05D001499 ORTHO05D001560 1.2e-24 115.9 63 87.3
BolC3t15159H Brassica oleracea HOM05D001499 ORTHO05D001560 1.2e-24 115.9 63 87.3
PGSC0003DMG400023691 Solanum tuberosum HOM05D001499 ORTHO05D001560 1.6e-24 115.5 65 87.7
unitig_26.g9049 Utricularia gibba HOM05D001499 ORTHO05D001560 1.6e-24 115.5 65 86.2
Aa31LG1G23700 Aethionema arabicum HOM05D001499 ORTHO05D001560 2.7e-24 114.8 63 85.7
CDE09G1433 Ceratophyllum demersum HOM05D001499 ORTHO05D001560 2.7e-24 114.8 61 90.2
AUR62024464 Chenopodium quinoa HOM05D001499 ORTHO05D001560 2.7e-24 114.8 65 86.2
ClCG04G003420 Citrullus lanatus HOM05D001499 ORTHO05D001560 2.7e-24 114.8 65 84.6
MELO3C023105.2 Cucumis melo HOM05D001499 ORTHO05D001560 2.7e-24 114.8 65 84.6
ECA236G5056 Erigeron canadensis HOM05D001499 ORTHO05D001560 2.7e-24 114.8 65 86.2
Sopen04g008040 Solanum pennellii HOM05D001499 ORTHO05D001560 3.5e-24 114.4 65 84.6
CsaV3_4G011840 Cucumis sativus L. HOM05D001499 ORTHO05D001560 4.6e-24 114.0 65 84.6
PGSC0003DMG402027256 Solanum tuberosum HOM05D001499 ORTHO05D001560 4.6e-24 114.0 65 86.2
Peaxi162Scf00130g00417 Petunia axillaris HOM05D001499 ORTHO05D001560 6.0e-24 113.6 65 86.2
Cc06_g17670 Coffea canephora HOM05D001499 ORTHO05D001560 1.3e-23 112.5 65 81.5
Sed0024523 Sechium edule HOM05D001499 ORTHO05D001560 3.0e-23 111.3 63 82.5
Pp3c20_5530 Physcomitrium patens HOM05D001499 ORTHO05D001560 6.6e-23 110.2 65 80.0
Lsat_1_v5_gn_8_81141 Lactuca sativa HOM05D001499 ORTHO05D001560 1.5e-22 109.0 63 81.0
Sed0013588 Sechium edule HOM05D001499 ORTHO05D001560 2.5e-22 108.2 63 81.0
Pp3c23_21190 Physcomitrium patens HOM05D001499 ORTHO05D001560 3.3e-22 107.8 63 81.0
Mapoly0129s0051 Marchantia polymorpha HOM05D001499 ORTHO05D001560 2.8e-21 104.8 65 76.9
SMO365G0084 Selaginella moellendorffii HOM05D001499 ORTHO05D001560 1.4e-20 102.4 65 72.3
MD12G1076800 Malus domestica HOM05D001499 ORTHO05D001560 1.8e-20 102.1 55 85.5
AagrBONN_evm.TU.Sc2ySwM_344.1124 Anthoceros agrestis HOM05D001499 ORTHO05D001560 3.1e-20 101.3 63 74.6
Migut.K00092 Erythranthe guttata HOM05D001499 ORTHO05D001560 6.4e-18 93.6 45 97.8
Duzib093G1808 Durio zibethinus HOM05D001499 ORTHO05D001560 1.4e-17 92.4 45 97.8
Gohir.A02G107400 Gossypium hirsutum HOM05D001499 ORTHO05D001560 1.9e-17 92.0 45 95.6
EL10Ac3g07103 Beta vulgaris HOM05D001499 ORTHO05D001560 5.4e-17 90.5 47 91.5
Glyma.02G185300 Glycine max HOM05D001499 ORTHO05D001560 1.2e-16 89.4 44 95.5
Cre01.g054150 Chlamydomonas reinhardtii HOM05D001499 ORTHO05D001560 1.7e-15 85.5 60 66.7
PRCOL_00001290 Prasinoderma coloniale HOM05D001499 ORTHO05D001560 1.1e-14 82.8 60 65.0
MCO09G099 Micromonas commoda HOM05D001499 ORTHO05D001560 1.6e-13 79.0 62 51.6
QL07p001252 Quercus lobata HOM05D001499 ORTHO05D001560 1.5e-11 72.4 36 94.4
SalBow6G2288 Salvia bowleyana HOM05D001499 ORTHO05D001560 7.6e-11 70.1 63 63.5
Actinidia17233 Actinidia chinensis HOM05D000141 ORTHO05D000780 9.9e-11 69.7 52 73.1
CBR_g49840 Chara braunii HOM05D000019 ORTHO05D000048 4.9e-10 67.4 44 70.5
Sabra06G0026000 Salix brachista HOM05D001499 ORTHO05D030935 4.9e-10 67.4 34 88.2
QL07p001014 Quercus lobata HOM05D001499 ORTHO05D030935 5.1e-07 57.4 31 87.1


User provided reference genes

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