Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 1.1e-184 649.8 328 100.0
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 4.7e-127 458.4 293 80.9
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 1.4e-123 446.8 293 78.5
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 6.6e-121 438.0 294 79.3
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 2.5e-120 436.0 293 78.8
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 6.8e-118 427.9 293 76.5
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 1.2e-117 427.2 293 75.8
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 2.0e-117 426.4 295 77.3
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 2.6e-117 426.0 293 76.5
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 4.4e-117 425.2 293 76.1
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 1.7e-116 423.3 294 75.9
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 8.3e-116 421.0 295 77.3
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 7.1e-115 417.9 293 75.4
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 7.1e-115 417.9 293 74.7
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 9.2e-115 417.5 293 76.1
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 1.6e-114 416.8 293 74.7
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.6e-114 416.8 295 75.6
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 2.1e-114 416.4 293 75.8
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 2.7e-114 416.0 296 75.0
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 4.6e-114 415.2 296 75.0
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 4.6e-114 415.2 294 77.2
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 6.0e-114 414.8 293 75.8
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.7e-113 413.3 293 75.4
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 3.9e-113 412.1 295 74.6
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 5.1e-113 411.8 293 75.4
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 6.6e-113 411.4 293 76.1
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.9e-112 409.8 301 73.8
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 2.5e-112 409.5 294 75.2
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 3.3e-112 409.1 293 74.7
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 5.6e-112 408.3 309 70.2
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.6e-111 406.8 293 74.7
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 2.1e-111 406.4 295 74.6
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 3.6e-111 405.6 293 74.1
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 6.2e-111 404.8 293 73.7
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 3.1e-110 402.5 296 73.0
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 5.2e-110 401.7 293 74.4
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 1.2e-109 400.6 293 73.7
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 2.0e-109 399.8 297 72.4
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 2.6e-109 399.4 293 73.7
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 5.8e-109 398.3 296 73.3
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 5.8e-109 398.3 298 70.8
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 1.3e-108 397.1 295 73.2
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 3.7e-108 395.6 294 72.4
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 3.7e-108 395.6 294 73.1
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 8.4e-108 394.4 293 73.4
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 1.4e-107 393.7 293 71.3
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 1.9e-107 393.3 296 72.3
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 9.2e-107 391.0 294 72.1
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.6e-106 390.2 294 71.1
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.0e-106 388.3 295 71.9
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 6.0e-106 388.3 294 71.1
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 1.0e-105 387.5 295 68.1
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 2.3e-105 386.3 293 71.3
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 3.0e-105 386.0 295 71.5
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 5.1e-105 385.2 296 72.6
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 5.1e-105 385.2 293 71.7
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 6.6e-105 384.8 295 71.5
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 8.6e-105 384.4 296 72.3
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.6e-105 384.4 295 70.8
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 8.6e-105 384.4 293 72.0
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 1.5e-104 383.6 297 71.0
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 1.5e-104 383.6 295 71.2
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.5e-104 383.6 295 71.5
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 3.3e-104 382.5 293 70.6
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 4.3e-104 382.1 295 70.8
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 9.6e-104 380.9 295 70.8
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 8.1e-103 377.9 294 69.7
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 8.1e-103 377.9 294 71.8
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.1e-102 377.5 294 69.4
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 1.8e-102 376.7 290 69.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 6.8e-102 374.8 300 69.3
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 6.8e-102 374.8 295 68.8
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 6.8e-102 374.8 294 69.7
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 1.5e-101 373.6 293 70.0
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 7.6e-101 371.3 294 69.4
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 2.2e-100 369.8 296 68.2
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 4.9e-100 368.6 225 83.6
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 2.4e-99 366.3 302 68.9
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 4.2e-99 365.5 296 67.9
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.7e-98 362.8 295 66.4
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.0e-97 360.9 296 67.6
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 2.3e-97 359.8 296 68.9
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 1.5e-96 357.1 381 57.0
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 3.3e-96 355.9 293 66.6
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.4e-94 350.5 294 65.6
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 2.4e-94 349.7 293 66.6
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 9.0e-94 347.8 294 65.3
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 3.4e-93 345.9 295 64.4
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 5.8e-93 345.1 293 65.2
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 7.6e-93 344.7 295 64.4
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 2.2e-92 343.2 293 63.8
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 2.2e-92 343.2 294 64.6
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 2.2e-92 343.2 294 64.6
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 2.2e-92 343.2 294 64.6
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 2.9e-92 342.8 232 75.9
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 3.8e-92 342.4 293 64.2
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 3.8e-92 342.4 257 72.0
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 1.4e-91 340.5 296 64.2
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 1.4e-91 340.5 296 64.2
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 1.4e-91 340.5 293 64.2
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 2.4e-91 339.7 293 64.2
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 2.7e-90 336.3 282 67.4
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 3.3e-88 329.3 231 73.2
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 4.8e-87 325.5 295 63.4
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 5.3e-86 322.0 231 73.2
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 7.1e-83 311.6 223 72.2
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 9.3e-83 311.2 279 63.1
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.0e-81 307.8 250 65.6
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.4e-78 296.6 203 75.4
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 3.1e-78 296.2 224 68.8
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 3.0e-73 279.6 220 65.5
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 4.5e-69 265.8 222 63.5
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.3e-68 264.2 213 69.0
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 2.8e-63 246.5 226 58.0
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 8.2e-63 245.0 201 61.7
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.1e-54 218.0 145 74.5
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 2.2e-52 210.3 124 79.8
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 6.1e-42 175.6 204 45.6
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 1.4e-41 174.5 203 44.3
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 2.7e-34 150.2 86 89.5
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 2.3e-33 147.1 221 39.4
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.5e-32 144.4 80 90.0
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 8.0e-26 122.1 86 72.1
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 2.8e-18 97.1 50 92.0
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 3.5e-13 80.1 88 55.7


User provided reference genes

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