Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022898 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 7.4e-64 246.9 113 100.0
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 4.0e-33 144.8 100 69.0
Dinv15795 Davidia involucrata HOM05D005520 ORTHO05D006633 1.4e-30 136.3 100 65.0
Rhsim05G0090000 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.6e-29 132.9 100 64.0
Lj5A217G90 Lonicera japonica HOM05D005520 ORTHO05D006633 2.7e-29 132.1 98 65.3
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 2.7e-29 132.1 97 66.0
Actinidia27983 Actinidia chinensis HOM05D005520 ORTHO05D006633 4.5e-29 131.3 101 60.4
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 1.3e-28 129.8 100 62.0
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 2.3e-28 129.0 98 63.3
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 2.3e-28 129.0 95 64.2
Dinv42222 Davidia involucrata HOM05D005520 ORTHO05D006633 3.8e-28 128.3 100 62.0
TWI14G1052 Tripterygium wilfordii HOM05D005520 ORTHO05D006633 3.8e-28 128.3 98 63.3
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 5.0e-28 127.9 94 66.0
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 8.6e-28 127.1 93 65.6
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 8.6e-28 127.1 94 62.8
Atru.chr5.2403 Acer truncatum HOM05D005520 ORTHO05D006633 1.1e-27 126.7 98 64.3
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 1.1e-27 126.7 100 62.0
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 1.1e-27 126.7 93 64.5
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 1.5e-27 126.3 94 64.9
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 1.9e-27 125.9 98 62.2
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 1.9e-27 125.9 92 66.3
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 1.9e-27 125.9 92 66.3
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 5.6e-27 124.4 95 61.1
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 5.6e-27 124.4 100 59.0
Gohir.D13G044800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 5.6e-27 124.4 93 64.5
Gorai.013G049600 Gossypium raimondii HOM05D005520 ORTHO05D006633 5.6e-27 124.4 93 64.5
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 7.3e-27 124.0 97 57.7
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 9.5e-27 123.6 93 62.4
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 1.2e-26 123.2 97 58.8
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 1.2e-26 123.2 97 60.8
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 1.2e-26 123.2 110 56.4
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 1.2e-26 123.2 94 61.7
TAR625G0105 Trochodendron aralioides HOM05D000641 ORTHO05D006633 1.2e-26 123.2 94 61.7
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 1.6e-26 122.9 96 59.4
Migut.B00427 Erythranthe guttata HOM05D005520 ORTHO05D006633 1.6e-26 122.9 100 58.0
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 1.6e-26 122.9 99 59.6
SalBow6G1186 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.6e-26 122.9 95 61.1
SalBow6G6323 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.6e-26 122.9 95 61.1
Cc02_g19680 Coffea canephora HOM05D005520 ORTHO05D006633 2.1e-26 122.5 91 64.8
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 2.1e-26 122.5 96 59.4
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 2.8e-26 122.1 97 57.7
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 3.6e-26 121.7 94 61.7
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 3.6e-26 121.7 94 61.7
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 3.6e-26 121.7 96 60.4
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 3.6e-26 121.7 97 57.7
Eucgr.G01264 Eucalyptus grandis HOM05D005520 ORTHO05D006633 4.7e-26 121.3 96 60.4
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 4.7e-26 121.3 96 58.3
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 4.7e-26 121.3 95 60.0
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 4.7e-26 121.3 96 58.3
RcHm_v2.0_Chr6g0253051 Rosa chinensis HOM05D005520 ORTHO05D006633 8.0e-26 120.6 96 58.3
Sc18g0003610 Simmondsia chinensis HOM05D005520 ORTHO05D006633 8.0e-26 120.6 93 63.4
ECA240G0181 Erigeron canadensis HOM05D005520 ORTHO05D006633 1.0e-25 120.2 97 59.8
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 1.0e-25 120.2 99 56.6
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 1.0e-25 120.2 100 58.0
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 1.0e-25 120.2 97 56.7
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 1.4e-25 119.8 96 57.3
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 1.4e-25 119.8 97 55.7
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 1.4e-25 119.8 92 63.0
Peaxi162Scf00429g00622 Petunia axillaris HOM05D005520 ORTHO05D006633 1.8e-25 119.4 92 63.0
Aa31LG10G4210 Aethionema arabicum HOM05D001821 ORTHO05D006633 2.3e-25 119.0 96 57.3
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 2.3e-25 119.0 96 57.3
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 2.3e-25 119.0 96 57.3
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 2.3e-25 119.0 96 57.3
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 2.3e-25 119.0 96 57.3
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 2.3e-25 119.0 96 57.3
Psat4g180760 Pisum sativum HOM05D005520 ORTHO05D006633 2.3e-25 119.0 97 55.7
Solyc11g071960.2 Solanum lycopersicum HOM05D005520 ORTHO05D006633 2.3e-25 119.0 92 63.0
Sopen11g029630 Solanum pennellii HOM05D005520 ORTHO05D006633 2.3e-25 119.0 92 63.0
PGSC0003DMG400002983 Solanum tuberosum HOM05D005520 ORTHO05D006633 2.3e-25 119.0 92 63.0
SGA_v2.0_scaffold225G43026 Striga asiatica HOM05D005520 ORTHO05D006633 2.3e-25 119.0 96 58.3
CAN.G689.10 Capsicum annuum HOM05D005520 ORTHO05D006633 3.0e-25 118.6 92 62.0
Lsat_1_v5_gn_9_112480 Lactuca sativa HOM05D005520 ORTHO05D006633 3.0e-25 118.6 100 56.0
unitig_37.g12800 Utricularia gibba HOM05D005520 ORTHO05D006633 3.0e-25 118.6 97 56.7
PSO541G2579 Papaver somniferum HOM05D005520 ORTHO05D006633 4.0e-25 118.2 91 59.3
HanXRQChr03g0069991 Helianthus annuus HOM05D005520 ORTHO05D006633 5.2e-25 117.9 96 59.4
DCAR_021961 Daucus carota HOM05D005520 ORTHO05D006633 6.8e-25 117.5 95 61.1
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 6.8e-25 117.5 97 55.7
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 8.9e-25 117.1 97 55.7
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 1.2e-24 116.7 112 50.9
CDE07G0521 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 1.5e-24 116.3 93 55.9
PSO675G3202 Papaver somniferum HOM05D005520 ORTHO05D006633 1.5e-24 116.3 91 58.2
Lj4g0000264 Lotus japonicus HOM05D005520 ORTHO05D006633 3.4e-24 115.2 97 54.6
CDE04G3180 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 7.5e-24 114.0 93 53.8
Zm00001eb007440 Zea mays HOM05D005520 ORTHO05D006633 7.5e-24 114.0 98 54.1
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 9.8e-24 113.6 92 58.7
Sed0007262 Sechium edule HOM05D005520 ORTHO05D006633 2.2e-23 112.5 97 54.6
HPP92_023672 Vanilla planifolia HOM05D005520 ORTHO05D006633 2.2e-23 112.5 93 57.0
HPP92_023689 Vanilla planifolia HOM05D005520 ORTHO05D006633 2.2e-23 112.5 93 57.0
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 3.7e-23 111.7 98 52.0
ClCG10G010520 Citrullus lanatus HOM05D005520 ORTHO05D006633 4.9e-23 111.3 96 56.2
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 6.4e-23 110.9 116 46.6
CANSAT25G2379 Cannabis sativa HOM05D005520 ORTHO05D006633 1.2e-21 106.7 98 52.0
RcHm_v2.0_Chr6g0253221 Rosa chinensis HOM05D005520 ORTHO05D006633 1.2e-21 106.7 95 53.7
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 1.0e-20 103.6 85 58.8
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 1.3e-20 103.2 75 64.0
Aqoxy6G02727 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 5.0e-20 101.3 77 59.7
Ciclev10029975m.g Citrus clementina HOM05D005520 ORTHO05D006633 1.9e-19 99.4 71 66.2
SEGI_34662 Sequoiadendron giganteum HOM05D005520 ORTHO05D006633 1.9e-19 99.4 91 51.6
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 1.2e-18 96.7 74 59.5
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 2.1e-18 95.9 87 50.6
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 3.6e-18 95.1 74 56.8
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 2.0e-16 89.4 96 50.0
Mapoly0036s0053 Marchantia polymorpha HOM05D005520 ORTHO05D006633 2.0e-16 89.4 91 47.3
Pp3c2_36820 Physcomitrium patens HOM05D005520 ORTHO05D006633 2.6e-16 89.0 92 47.8
CBR_g31027 Chara braunii HOM05D005520 ORTHO05D006633 3.4e-16 88.6 91 44.0
SMO172G0176 Selaginella moellendorffii HOM05D005520 ORTHO05D006633 2.2e-15 85.9 91 46.2
CBR_g2851 Chara braunii HOM05D005520 ORTHO05D006633 6.4e-15 84.3 91 40.7
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 2.4e-14 82.4 50 76.0
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 2.3e-12 75.9 48 70.8
vmacro01971 Vaccinium macrocarpon HOM05D005520 ORTHO05D006633 6.6e-12 74.3 69 53.6
Medtr0857s0010 Medicago truncatula HOM05D005520 ORTHO05D006633 1.1e-11 73.6 47 70.2
Psat6g139520 Pisum sativum HOM05D005520 ORTHO05D006633 1.9e-11 72.8 48 66.7
Pp3c19_18310 Physcomitrium patens HOM05D005520 ORTHO05D006633 7.3e-11 70.9 89 39.3
Psat7g087120 Pisum sativum HOM05D005520 ORTHO05D006633 9.5e-11 70.5 48 64.6
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 1.6e-10 69.7 47 63.8
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 2.6e-08 62.4 38 68.4
A06p03510 Brassica napus HOM05D005520 ORTHO05D006633 4.4e-08 61.6 35 68.6
BraA06t23559Z Brassica rapa HOM05D005520 ORTHO05D006633 4.4e-08 61.6 35 68.6
Cre03.g173200 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 9.9e-08 60.5 79 39.2
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 1.9e-06 56.2 54 48.1
Atru.chr9.1169 Acer truncatum HOM05D003028 ORTHO05D037933 5.4e-06 54.7 29 79.3


User provided reference genes

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