Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 6.9e-141 503.8 233 100.0
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 4.4e-111 404.8 228 83.3
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 5.4e-109 397.9 227 80.2
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 3.6e-105 385.2 226 77.9
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 2.2e-102 375.9 249 71.9
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.3e-99 366.7 245 70.2
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.3e-99 366.7 245 70.2
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 2.0e-95 352.8 227 68.7
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 2.6e-95 352.4 241 67.2
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 4.4e-95 351.7 247 66.4
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 4.4e-95 351.7 247 68.0
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 1.3e-94 350.1 227 68.3
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 4.9e-94 348.2 239 66.9
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.1e-93 347.1 240 66.7
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.9e-93 346.3 227 67.0
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 5.4e-93 344.7 235 67.2
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 3.5e-92 342.0 269 61.7
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 6.0e-92 341.3 227 67.8
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.0e-91 340.5 227 64.3
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 1.7e-91 339.7 230 66.1
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 3.0e-91 339.0 240 65.0
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 3.9e-91 338.6 230 67.8
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 5.0e-91 338.2 220 70.0
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 6.6e-91 337.8 242 64.5
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.5e-90 336.7 240 64.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.5e-90 336.7 240 64.6
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 2.5e-90 335.9 241 65.1
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 5.6e-90 334.7 217 66.8
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 7.3e-90 334.3 228 64.5
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 7.3e-90 334.3 240 64.2
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 1.2e-89 333.6 222 66.2
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.8e-89 332.4 227 66.1
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 2.8e-89 332.4 218 68.3
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 2.8e-89 332.4 228 66.2
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 2.3e-88 329.3 240 65.4
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 2.0e-87 326.2 270 58.9
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 7.5e-87 324.3 228 65.8
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.3e-86 323.6 226 66.8
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 2.2e-86 322.8 227 63.4
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 8.3e-86 320.9 211 70.1
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.9e-85 319.7 222 65.8
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 4.1e-85 318.5 245 59.6
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 5.4e-85 318.2 245 59.2
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.2e-84 317.0 259 58.3
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.2e-84 317.0 229 63.8
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 2.1e-84 316.2 233 62.7
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.7e-83 313.2 245 57.6
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 3.0e-83 312.4 222 64.4
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 3.9e-83 312.0 204 67.6
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 5.1e-83 311.6 231 64.9
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 7.3e-82 307.8 250 59.2
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 1.2e-81 307.0 203 70.4
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 2.8e-81 305.8 227 59.0
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 3.6e-81 305.4 231 62.3
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 8.1e-81 304.3 240 59.6
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 8.1e-81 304.3 200 67.0
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.3e-80 302.8 210 63.8
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 3.1e-80 302.4 237 58.6
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 5.2e-80 301.6 235 57.0
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.5e-79 300.1 236 59.7
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.5e-79 300.1 222 61.7
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.0e-79 299.7 249 59.8
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 2.9e-78 295.8 239 60.7
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.9e-78 295.8 227 59.9
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 3.8e-78 295.4 246 60.2
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 4.9e-78 295.0 246 60.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 4.9e-78 295.0 223 59.6
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 6.4e-78 294.7 217 62.7
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.4e-78 294.7 211 62.6
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 8.4e-78 294.3 220 63.2
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 1.4e-77 293.5 217 62.7
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 2.4e-77 292.7 244 61.1
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 4.1e-77 292.0 229 59.8
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 4.1e-77 292.0 263 55.5
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 5.4e-77 291.6 200 65.5
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 5.4e-77 291.6 241 58.1
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.1e-76 289.7 229 59.0
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 6.0e-76 288.1 248 58.5
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 1.0e-75 287.3 235 59.6
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.3e-75 287.0 253 56.5
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 2.3e-75 286.2 257 56.0
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 5.1e-75 285.0 236 61.9
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 5.1e-75 285.0 249 57.0
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 8.6e-75 284.3 226 57.5
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 8.6e-75 284.3 226 57.5
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 1.9e-74 283.1 236 61.4
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 4.3e-74 282.0 236 60.2
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 7.3e-74 281.2 254 56.7
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.6e-73 280.0 230 60.0
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.1e-73 279.6 226 58.8
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.8e-73 279.3 261 54.0
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 3.6e-73 278.9 238 57.6
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 4.7e-73 278.5 242 53.3
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.9e-69 266.5 204 63.7
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 1.9e-69 266.5 185 66.5
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.2e-69 265.8 240 56.2
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 4.2e-69 265.4 201 64.2
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.2e-69 265.4 240 56.2
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.2e-69 265.4 240 56.2
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 7.1e-69 264.6 240 56.2
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.6e-68 263.5 227 58.6
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.5e-66 256.9 227 57.7
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 3.6e-65 252.3 230 54.8
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 4.5e-63 245.4 220 55.5
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 5.8e-63 245.0 206 59.7
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 5.8e-63 245.0 206 59.7
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 5.4e-61 238.4 139 74.8
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 6.0e-60 235.0 149 70.5
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 6.7e-59 231.5 208 54.8
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 8.7e-59 231.1 201 55.7
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 3.1e-56 222.6 191 55.0
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 3.9e-51 205.7 121 69.4
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.9e-50 203.4 228 46.9
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 1.3e-38 164.1 122 59.0
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 3.0e-35 152.9 97 70.1
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.3e-34 149.1 120 54.2
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.3e-34 149.1 120 54.2
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 1.1e-32 144.4 84 65.5
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 2.1e-28 130.2 124 46.8
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.8e-24 117.1 165 45.5
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 3.5e-07 59.7 76 42.1


User provided reference genes

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