Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022855 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 4.4e-286 987.3 498 100.0
CSS0036062 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 2.6e-222 775.4 511 81.4
CSS0020752 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 4.5e-222 774.6 507 81.7
CSS0000228 Camellia sinensis var. sinensis HOM05D005578 ORTHO05D006969 1.3e-221 773.1 511 81.2
Actinidia27108 Actinidia chinensis HOM05D005578 ORTHO05D006969 1.7e-181 639.8 506 68.8
vmacro00704 Vaccinium macrocarpon HOM05D005578 ORTHO05D006969 1.6e-179 633.3 509 68.6
Dinv33195 Davidia involucrata HOM05D005578 ORTHO05D006969 8.3e-176 620.9 513 65.1
Rhsim09G0010700 Rhododendron simsii HOM05D005578 ORTHO05D006969 4.3e-172 608.6 497 67.8
GSVIVG01038127001 Vitis vinifera HOM05D005578 ORTHO05D006969 2.8e-171 605.9 512 63.5
Hma1.2p1_0150F.1_g066670 Hydrangea macrophylla HOM05D005578 ORTHO05D006969 1.6e-166 590.1 502 63.5
TAR365G0588 Trochodendron aralioides HOM05D005578 ORTHO05D006969 8.7e-157 557.8 520 60.4
QL10p054496 Quercus lobata HOM05D005578 ORTHO05D006969 6.2e-155 551.6 516 59.3
Duzib084G0701 Durio zibethinus HOM05D005578 ORTHO05D006969 1.1e-154 550.8 500 59.4
QL10p053362 Quercus lobata HOM05D005578 ORTHO05D006969 4.0e-154 548.9 516 59.1
Atru.chr4.1387 Acer truncatum HOM05D005578 ORTHO05D006969 4.4e-153 545.4 513 59.5
Gohir.D09G171900 Gossypium hirsutum HOM05D005578 ORTHO05D006969 6.4e-152 541.6 507 59.4
MD04G1048400 Malus domestica HOM05D005578 ORTHO05D006969 1.4e-151 540.4 517 56.7
Gorai.006G193800 Gossypium raimondii HOM05D005578 ORTHO05D006969 1.9e-151 540.0 505 59.0
Thecc.03G041600 Theobroma cacao HOM05D005578 ORTHO05D006969 1.9e-151 540.0 504 58.3
Ciclev10020255m.g Citrus clementina HOM05D005578 ORTHO05D006969 4.2e-151 538.9 406 68.0
Gohir.A09G176200 Gossypium hirsutum HOM05D005578 ORTHO05D006969 1.6e-150 537.0 505 59.0
Eucgr.A00019 Eucalyptus grandis HOM05D005578 ORTHO05D006969 3.5e-150 535.8 512 57.8
COL.COLO4_38536 Corchorus olitorius HOM05D005578 ORTHO05D006969 4.6e-150 535.4 523 57.2
RcHm_v2.0_Chr4g0406211 Rosa chinensis HOM05D005578 ORTHO05D006969 1.3e-149 533.9 506 57.1
Prupe.1G080200 Prunus persica HOM05D005578 ORTHO05D006969 1.9e-148 530.0 515 55.5
Manes.04G036900 Manihot esculenta HOM05D005578 ORTHO05D006969 1.3e-147 527.3 511 55.4
CiPaw.02G101100 Carya illinoinensis HOM05D005578 ORTHO05D006969 3.6e-147 525.8 516 56.2
MBI08_g25556_MAGBIO Magnolia biondii HOM05D005578 ORTHO05D006969 1.8e-146 523.5 532 54.9
TWI63G0500 Tripterygium wilfordii HOM05D005578 ORTHO05D006969 1.2e-145 520.8 407 65.6
Potri.006G123700 Populus trichocarpa HOM05D005578 ORTHO05D006969 5.8e-145 518.5 511 56.0
Sc18g0007160 Simmondsia chinensis HOM05D005578 ORTHO05D006969 2.9e-144 516.2 512 54.7
Sabra06G0097900 Salix brachista HOM05D005578 ORTHO05D006969 1.1e-143 514.2 504 56.0
FAN12G1674 Fragaria x ananassa HOM05D005578 ORTHO05D006969 9.3e-143 511.1 500 56.6
FAN12G2406 Fragaria x ananassa HOM05D005578 ORTHO05D006969 2.7e-142 509.6 500 56.4
SalBow4G1988 Salvia bowleyana HOM05D005578 ORTHO05D006969 3.5e-142 509.2 512 56.4
FAN22G0827 Fragaria x ananassa HOM05D005578 ORTHO05D006969 2.3e-141 506.5 495 57.0
SalBow4G1580 Salvia bowleyana HOM05D005578 ORTHO05D006969 2.3e-141 506.5 515 56.3
Cpa.g.sc9.352 Carica papaya HOM05D005578 ORTHO05D006969 1.1e-140 504.2 517 54.5
FAN07G2607 Fragaria x ananassa HOM05D005578 ORTHO05D006969 1.1e-140 504.2 525 53.5
ClCG07G015240 Citrullus lanatus HOM05D005578 ORTHO05D006969 1.9e-140 503.4 506 55.3
Cc00_g24800 Coffea canephora HOM05D005578 ORTHO05D006969 1.9e-140 503.4 504 54.0
PGR083G2150 Punica granatum HOM05D005578 ORTHO05D006969 3.3e-140 502.7 402 61.9
CsaV3_4G002830 Cucumis sativus L. HOM05D005578 ORTHO05D006969 1.6e-139 500.4 506 55.3
Ca_12803_v3 Cicer arietinum L. HOM05D005578 ORTHO05D006969 2.8e-139 499.6 513 55.4
Ca_12815_v3 Cicer arietinum L. HOM05D005578 ORTHO05D006969 2.8e-139 499.6 513 55.4
Lalb_Chr10g0096771 Lupinus albus HOM05D005578 ORTHO05D006969 3.7e-139 499.2 500 55.0
Phvul.005G177500 Phaseolus vulgaris HOM05D005578 ORTHO05D006969 1.1e-138 497.7 508 55.1
Lj3A157G51 Lonicera japonica HOM05D005578 ORTHO05D006969 1.4e-138 497.3 370 67.3
DCAR_028436 Daucus carota HOM05D005578 ORTHO05D006969 2.0e-137 493.4 382 64.4
Glyma.15G008200 Glycine max HOM05D005578 ORTHO05D006969 5.8e-137 491.9 507 55.0
Lj1g0014139 Lotus japonicus HOM05D005578 ORTHO05D006969 9.3e-135 484.6 514 52.5
Lj2g0024445 Lotus japonicus HOM05D005578 ORTHO05D006969 1.6e-134 483.8 507 53.1
Hund00394 Selenicereus undatus HOM05D005578 ORTHO05D006969 7.9e-134 481.5 519 52.0
Migut.N01914 Erythranthe guttata HOM05D005578 ORTHO05D006969 1.0e-133 481.1 504 54.0
Psat6g034120 Pisum sativum HOM05D005578 ORTHO05D006969 1.0e-133 481.1 515 53.4
ECA232G2403 Erigeron canadensis HOM05D005578 ORTHO05D006969 1.3e-133 480.7 503 53.9
Nn3g18569 Nelumbo nucifera HOM05D005578 ORTHO05D006969 5.1e-133 478.8 523 51.2
Nitab4.5_0000387g0110 Nicotiana tabacum HOM05D005578 ORTHO05D006969 1.5e-132 477.2 511 52.4
CANSAT78G2511 Cannabis sativa HOM05D005578 ORTHO05D006969 1.9e-132 476.9 502 53.6
MSTRG.28018 Avicennia marina HOM05D005578 ORTHO05D006969 5.7e-132 475.3 497 52.9
THA.LOC104802321 Tarenaya hassleriana HOM05D005578 ORTHO05D006969 5.7e-132 475.3 523 51.8
CANSAT35G1372 Cannabis sativa HOM05D005578 ORTHO05D006969 1.6e-131 473.8 401 60.3
CAN.G128.150 Capsicum annuum HOM05D005578 ORTHO05D006969 1.6e-131 473.8 510 52.0
VMungo1080G0492 Vigna mungo HOM05D005578 ORTHO05D006969 1.6e-131 473.8 551 51.0
Sopen10g032050 Solanum pennellii HOM05D005578 ORTHO05D006969 2.1e-131 473.4 515 51.7
HanXRQChr02g0059791 Helianthus annuus HOM05D005578 ORTHO05D006969 2.8e-131 473.0 507 52.9
Peaxi162Scf00568g00519 Petunia axillaris HOM05D005578 ORTHO05D006969 2.8e-131 473.0 398 60.6
Haze_01375 Corylus avellana HOM05D005578 ORTHO05D006969 4.8e-131 472.2 591 47.7
Ah.01g024150 Amaranthus hybridus HOM05D005578 ORTHO05D006969 1.8e-130 470.3 515 49.5
Solyc10g081540.2 Solanum lycopersicum HOM05D005578 ORTHO05D006969 2.4e-130 469.9 511 50.5
PGSC0003DMG400028219 Solanum tuberosum HOM05D005578 ORTHO05D006969 6.9e-130 468.4 511 50.9
Medtr1g008370 Medicago truncatula HOM05D005578 ORTHO05D006969 2.0e-129 466.8 515 53.2
Aqoxy5G03977 Aquilegia oxysepala HOM05D005578 ORTHO05D006969 5.9e-129 465.3 512 52.1
arahy.Tifrunner.gnm1.ann1.22GNET Arachis hypogaea HOM05D005578 ORTHO05D006969 1.7e-128 463.8 507 51.3
arahy.Tifrunner.gnm1.ann1.SET2JR Arachis hypogaea HOM05D005578 ORTHO05D006969 1.7e-128 463.8 507 51.3
AUR62030923 Chenopodium quinoa HOM05D005578 ORTHO05D006969 1.4e-127 460.7 517 50.1
AUR62027084 Chenopodium quinoa HOM05D005578 ORTHO05D006969 2.1e-126 456.8 517 50.1
Sp5g03550 Schrenkiella parvula HOM05D005578 ORTHO05D006969 1.3e-125 454.1 517 50.9
AT3G59630 Arabidopsis thaliana HOM05D005578 ORTHO05D006969 1.9e-124 450.3 507 51.5
BraA09t40625Z Brassica rapa HOM05D005578 ORTHO05D006969 3.3e-124 449.5 508 51.6
PSO017G0139 Papaver somniferum HOM05D005578 ORTHO05D006969 4.3e-124 449.1 525 48.8
A09p51890 Brassica napus HOM05D005578 ORTHO05D006969 5.7e-124 448.7 508 51.8
CARHR220950 Cardamine hirsuta HOM05D005578 ORTHO05D006969 5.7e-124 448.7 509 50.9
Aa31LG10G13930 Aethionema arabicum HOM05D005578 ORTHO05D006969 2.2e-123 446.8 543 48.8
Carub.0005s2633 Capsella rubella HOM05D005578 ORTHO05D006969 2.2e-123 446.8 506 50.6
EL10Ac9g22122 Beta vulgaris HOM05D005578 ORTHO05D006969 3.7e-123 446.0 515 47.4
PSO675G5381 Papaver somniferum HOM05D005578 ORTHO05D006969 3.7e-123 446.0 529 48.4
BcaC07g40470 Brassica carinata HOM05D005578 ORTHO05D006969 8.2e-123 444.9 515 50.7
Lsat_1_v5_gn_2_34381 Lactuca sativa HOM05D005578 ORTHO05D006969 1.1e-122 444.5 503 50.9
PSO478G3531 Papaver somniferum HOM05D005578 ORTHO05D006969 1.1e-122 444.5 525 48.8
BolC8t51064H Brassica oleracea HOM05D005578 ORTHO05D006969 1.4e-122 444.1 508 51.4
Thhalv10028620m.g Eutrema salsugineum HOM05D005578 ORTHO05D006969 1.4e-122 444.1 506 50.4
BcaC07g40493 Brassica carinata HOM05D005578 ORTHO05D006969 1.8e-122 443.7 508 51.4
C08p34620 Brassica napus HOM05D005578 ORTHO05D006969 1.8e-122 443.7 508 51.4
CDE08G0459 Ceratophyllum demersum HOM05D005578 ORTHO05D006969 1.0e-120 438.0 532 48.1
Cc03_g13760 Coffea canephora HOM05D005578 ORTHO05D006969 5.0e-120 435.6 353 61.5
Os11g0265600 Oryza sativa ssp. japonica HOM05D005578 ORTHO05D006969 6.7e-117 425.2 513 47.4
TPR.G12104 Trifolium pratense HOM05D005578 ORTHO05D006969 2.8e-115 419.9 514 48.8
Zm00001eb064030 Zea mays HOM05D005578 ORTHO05D006969 2.5e-111 406.8 519 45.5
HPP92_007603 Vanilla planifolia HOM05D005578 ORTHO05D006969 5.5e-111 405.6 517 47.0
Thhalv10005976m.g Eutrema salsugineum HOM05D005578 ORTHO05D006969 2.5e-103 380.2 425 51.1
SEGI_35608 Sequoiadendron giganteum HOM05D005578 ORTHO05D006969 1.0e-101 374.8 540 41.9
SGA_v2.0_scaffold81G26092 Striga asiatica HOM05D005578 ORTHO05D006969 1.4e-101 374.4 601 40.6
AL5G41540 Arabidopsis lyrata HOM05D005578 ORTHO05D006969 6.7e-101 372.1 506 45.7
MELO3C017758.2 Cucumis melo HOM05D005578 ORTHO05D006969 7.0e-98 362.1 381 55.6
Cc00_g21820 Coffea canephora HOM05D005578 ORTHO05D006969 1.2e-97 361.3 296 61.5
unitig_21.g20051 Utricularia gibba HOM05D005578 ORTHO05D006969 2.7e-97 360.1 479 45.5
FvH4_4g10580 Fragaria vesca HOM05D005578 ORTHO05D006969 3.5e-97 359.8 375 53.9
AL5G41640 Arabidopsis lyrata HOM05D005578 ORTHO05D006969 4.2e-95 352.8 507 44.4
Nitab4.5_0002087g0070 Nicotiana tabacum HOM05D005578 ORTHO05D006969 5.5e-87 325.9 385 49.4
AL5G41610 Arabidopsis lyrata HOM05D005578 ORTHO05D006969 8.8e-85 318.5 451 45.0
Glyma.13G365067 Glycine max HOM05D005578 ORTHO05D006969 4.9e-83 312.8 238 67.2
AagrBONN_evm.TU.Sc2ySwM_117.2191 Anthoceros agrestis HOM05D005578 ORTHO05D006969 1.1e-82 311.6 470 40.6
Mapoly0065s0036 Marchantia polymorpha HOM05D005578 ORTHO05D006969 1.8e-82 310.8 468 40.2
SHI16665 Sapria himalayana HOM05D005578 ORTHO05D006969 1.0e-80 305.1 275 57.8
Pp3c8_4090 Physcomitrium patens HOM05D005578 ORTHO05D006969 9.2e-74 282.0 550 33.8
CBR_g26331 Chara braunii HOM05D005578 ORTHO05D006969 2.5e-63 247.3 444 37.8
SMO203G0280 Selaginella moellendorffii HOM05D005578 ORTHO05D006969 4.0e-61 240.0 318 41.8
Sed0004414 Sechium edule HOM05D005578 ORTHO05D006969 1.2e-57 228.4 314 46.5
Phvul.L003146 Phaseolus vulgaris HOM05D005578 ORTHO05D006969 1.2e-54 218.4 179 63.7
ATR0743G025 Amborella trichopoda HOM05D005578 ORTHO05D006969 1.1e-50 205.3 326 40.2
Cre08.g376150 Chlamydomonas reinhardtii HOM05D005578 ORTHO05D006969 2.5e-39 167.5 321 36.4
MCO11G524 Micromonas commoda HOM05D005578 ORTHO05D006969 2.1e-38 164.5 329 33.7
PRCOL_00000644 Prasinoderma coloniale HOM05D005578 ORTHO05D006969 2.6e-36 157.5 413 30.8
SHI16666 Sapria himalayana HOM05D005578 ORTHO05D006969 2.4e-29 134.4 159 43.4
Hma1.2p1_0150F.1_g066660 Hydrangea macrophylla HOM05D005578 ORTHO05D006969 9.6e-23 112.5 75 73.3
Gorai.009G416000 Gossypium raimondii HOM05D005578 ORTHO05D046863 3.7e-22 110.5 123 50.4
Cfa025460 Carpinus fangiana HOM05D005578 ORTHO05D006969 1.8e-21 108.2 144 39.6
Gohir.A04G073032 Gossypium hirsutum HOM05D005578 ORTHO05D046863 3.1e-21 107.5 120 49.2
Glyma.13G365133 Glycine max HOM05D005578 ORTHO05D006969 1.6e-14 85.1 86 52.3
TPR.G17732 Trifolium pratense HOM05D005578 ORTHO05D006969 1.1e-10 72.4 78 47.4
CAN.G474.25 Capsicum annuum HOM05D006423 ORTHO05D008233 6.1e-09 66.6 153 25.5
Dinv06913 Davidia involucrata HOM05D006423 ORTHO05D008233 1.8e-08 65.1 168 26.2
Sabra19G0051500 Salix brachista HOM05D006423 ORTHO05D008233 1.8e-08 65.1 287 22.3
Solyc06g066300.1 Solanum lycopersicum HOM05D006423 ORTHO05D008233 5.1e-08 63.5 153 24.8
Sopen06g021720 Solanum pennellii HOM05D006423 ORTHO05D008233 5.1e-08 63.5 153 24.8
Glyma.12G035900 Glycine max HOM05D006423 ORTHO05D008233 6.7e-08 63.2 157 23.6
Potri.019G041300 Populus trichocarpa HOM05D006423 ORTHO05D008233 8.7e-08 62.8 278 21.9
unitig_748.g8133 Utricularia gibba HOM05D006423 ORTHO05D008233 8.7e-08 62.8 130 27.7
PGSC0003DMG400016779 Solanum tuberosum HOM05D006423 ORTHO05D008233 1.5e-07 62.0 153 24.2
Gohir.A03G210100 Gossypium hirsutum HOM05D006423 ORTHO05D008233 2.5e-07 61.2 130 27.7
EL10Ac4g08897 Beta vulgaris HOM05D006423 ORTHO05D008233 3.3e-07 60.8 153 24.8
Peaxi162Scf00185g01125 Petunia axillaris HOM05D006423 ORTHO05D008233 3.3e-07 60.8 153 24.2
Psat6g092640 Pisum sativum HOM05D005578 ORTHO05D006969 3.3e-07 60.8 36 75.0
ATR0564G315 Amborella trichopoda HOM05D006423 ORTHO05D008233 4.3e-07 60.5 130 26.2
COL.COLO4_17915 Corchorus olitorius HOM05D006423 ORTHO05D008233 4.3e-07 60.5 130 26.9
Duzib132G0113 Durio zibethinus HOM05D006423 ORTHO05D008233 5.7e-07 60.1 130 27.7
Ciclev10001185m.g Citrus clementina HOM05D006423 ORTHO05D008233 7.4e-07 59.7 131 27.5
MELO3C018682.2 Cucumis melo HOM05D006423 ORTHO05D008233 7.4e-07 59.7 130 26.9
Gorai.005G259400 Gossypium raimondii HOM05D006423 ORTHO05D008233 9.7e-07 59.3 130 26.9
Nitab4.5_0002429g0030 Nicotiana tabacum HOM05D003584 ORTHO05D008233 9.7e-07 59.3 131 26.7
Aqoxy4G02654 Aquilegia oxysepala HOM05D006423 ORTHO05D008233 1.3e-06 58.9 130 27.7
Gohir.D02G231700 Gossypium hirsutum HOM05D006423 ORTHO05D008233 1.3e-06 58.9 130 26.9
Cre09.g408500 Chlamydomonas reinhardtii HOM05D006423 ORTHO05D008233 1.6e-06 58.5 107 29.0
ClCG09G013540 Citrullus lanatus HOM05D006423 ORTHO05D008233 2.2e-06 58.2 130 26.9
Thecc.02G043600 Theobroma cacao HOM05D006423 ORTHO05D008233 2.2e-06 58.2 130 26.2
FvH4_5g30480 Fragaria vesca HOM05D006423 ORTHO05D008233 2.8e-06 57.8 152 23.7
FAN08G0633 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.8e-06 57.8 152 23.7
FAN13G0653 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.8e-06 57.8 152 23.7
FAN18G4202 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.8e-06 57.8 152 23.7
Nitab4.5_0001632g0060 Nicotiana tabacum HOM05D006423 ORTHO05D008233 2.8e-06 57.8 131 26.7
Phvul.002G038000 Phaseolus vulgaris HOM05D006423 ORTHO05D008233 2.8e-06 57.8 157 22.3
Sp2g25200 Schrenkiella parvula HOM05D006423 ORTHO05D008233 2.8e-06 57.8 153 24.2
Actinidia01333 Actinidia chinensis HOM05D006423 ORTHO05D008233 3.7e-06 57.4 152 27.0
Carub.0008s2271 Capsella rubella HOM05D006423 ORTHO05D008233 3.7e-06 57.4 166 24.7
CsaV3_7G006110 Cucumis sativus L. HOM05D006423 ORTHO05D008233 3.7e-06 57.4 130 26.2
Psat0s769g0120 Pisum sativum HOM05D006423 ORTHO05D008233 3.7e-06 57.4 153 23.5
PSO170G0343 Papaver somniferum HOM05D006423 ORTHO05D008233 4.8e-06 57.0 125 27.2
Ah.04g162870 Amaranthus hybridus HOM05D006423 ORTHO05D008233 6.3e-06 56.6 153 23.5
AT5G62030 Arabidopsis thaliana HOM05D006423 ORTHO05D008233 6.3e-06 56.6 166 24.1
BcaB02g09615 Brassica carinata HOM05D006423 ORTHO05D008233 6.3e-06 56.6 125 26.4
MD04G1037900 Malus domestica HOM05D006423 ORTHO05D008233 6.3e-06 56.6 153 22.2
Sed0023404 Sechium edule HOM05D006423 ORTHO05D008233 6.3e-06 56.6 130 27.7
Lalb_Chr05g0211301 Lupinus albus HOM05D006423 ORTHO05D008233 8.2e-06 56.2 130 26.2
THA.LOC104798941 Tarenaya hassleriana HOM05D006423 ORTHO05D008233 8.2e-06 56.2 125 26.4


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