Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022852 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.9e-204 715.7 371 100.0
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 7.3e-177 624.0 364 88.7
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 6.2e-176 620.9 371 89.2
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 7.9e-171 604.0 361 84.8
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 1.3e-170 603.2 364 86.0
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 3.9e-170 601.7 358 85.8
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 2.5e-169 599.0 361 84.8
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 3.3e-169 598.6 428 77.1
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 1.3e-168 596.7 369 83.7
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 4.0e-167 591.7 361 83.7
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 4.0e-167 591.7 369 82.7
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.2e-166 590.1 369 81.8
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 3.4e-166 588.6 363 81.5
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 4.5e-166 588.2 363 83.5
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 7.6e-166 587.4 363 81.3
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 9.9e-166 587.0 356 84.0
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 9.9e-166 587.0 363 81.3
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.2e-165 585.9 369 81.3
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 2.9e-165 585.5 363 80.7
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 6.4e-165 584.3 362 83.4
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 6.4e-165 584.3 360 83.3
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 8.4e-165 583.9 363 80.7
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 1.1e-164 583.6 364 82.1
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 1.4e-164 583.2 368 81.2
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 7.1e-164 580.9 363 80.2
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 9.3e-164 580.5 372 81.5
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 1.2e-163 580.1 358 80.7
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 1.2e-163 580.1 357 84.9
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 1.2e-163 580.1 363 82.1
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 2.1e-163 579.3 371 80.9
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 2.7e-163 578.9 364 81.3
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.7e-163 578.9 369 81.0
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 3.5e-163 578.6 359 83.0
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 7.9e-163 577.4 359 83.6
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 1.3e-162 576.6 369 79.4
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 3.9e-162 575.1 364 82.4
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 6.7e-162 574.3 358 80.4
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 8.7e-162 573.9 358 81.6
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 1.1e-161 573.5 364 79.4
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 1.1e-161 573.5 364 79.4
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 1.1e-161 573.5 358 81.6
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.5e-161 573.2 358 81.6
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 1.5e-161 573.2 358 82.7
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 1.9e-161 572.8 359 81.3
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.9e-161 572.8 362 80.4
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 4.3e-161 571.6 358 81.8
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 4.3e-161 571.6 356 81.2
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 4.3e-161 571.6 363 82.1
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 5.6e-161 571.2 359 81.1
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 5.6e-161 571.2 357 82.9
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 5.6e-161 571.2 356 81.5
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 7.4e-161 570.9 358 79.9
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 9.6e-161 570.5 358 81.3
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 9.6e-161 570.5 360 82.2
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 1.3e-160 570.1 362 80.1
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 1.6e-160 569.7 415 74.0
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 2.8e-160 568.9 370 79.7
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.8e-160 568.9 358 79.9
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 3.7e-160 568.5 360 81.4
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 4.8e-160 568.2 358 80.7
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 6.2e-160 567.8 368 78.5
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 6.2e-160 567.8 356 79.8
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 8.1e-160 567.4 359 80.8
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 1.4e-159 566.6 355 81.1
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 1.4e-159 566.6 363 81.3
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 2.4e-159 565.8 360 79.7
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 4.0e-159 565.1 368 78.3
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 4.0e-159 565.1 354 82.5
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 5.3e-159 564.7 359 79.1
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 9.0e-159 563.9 361 82.0
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 9.0e-159 563.9 365 80.0
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 1.2e-158 563.5 362 79.6
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 2.0e-158 562.8 359 81.3
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 2.2e-157 559.3 358 79.9
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 4.9e-157 558.1 361 78.7
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 4.9e-157 558.1 355 80.6
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 4.9e-157 558.1 359 78.6
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 1.1e-156 557.0 359 79.1
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 1.9e-156 556.2 357 80.1
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 7.1e-156 554.3 337 84.6
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 9.3e-156 553.9 359 79.4
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 1.2e-155 553.5 355 79.7
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 1.6e-155 553.1 361 78.7
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 1.3e-154 550.1 359 79.4
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 1.8e-154 549.7 356 78.4
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 5.1e-154 548.1 355 80.6
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 8.7e-154 547.4 385 74.0
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 1.1e-153 547.0 366 76.8
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 2.5e-153 545.8 358 78.5
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 2.5e-153 545.8 377 76.9
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 5.7e-153 544.7 362 77.1
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 7.4e-153 544.3 366 76.2
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 1.3e-152 543.5 354 77.4
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 3.7e-152 542.0 383 75.5
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 1.1e-151 540.4 368 75.5
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 2.0e-150 536.2 362 77.3
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 5.9e-150 534.6 364 75.3
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 5.9e-150 534.6 335 81.2
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 5.0e-149 531.6 336 79.8
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 4.3e-145 518.5 353 77.1
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 7.4e-145 517.7 368 73.4
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 2.8e-144 515.8 372 72.8
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 3.1e-143 512.3 363 73.6
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 2.0e-142 509.6 356 74.7
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 1.0e-141 507.3 359 73.3
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 6.5e-141 504.6 365 74.2
Lj6A103G48 Lonicera japonica HOM05D003653 ORTHO05D004249 7.2e-140 501.1 362 74.3
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 5.1e-138 495.0 354 71.8
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 5.7e-137 491.5 369 73.7
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 4.7e-131 471.9 356 71.6
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 2.6e-126 456.1 359 66.6
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 3.0e-122 442.6 362 68.2
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 7.7e-118 427.9 362 61.6
Haze_16164 Corylus avellana HOM05D003653 ORTHO05D004249 1.5e-116 423.7 360 65.3
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 1.2e-113 414.1 360 63.1
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 5.4e-111 405.2 358 62.6
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 2.3e-106 389.8 348 58.6
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 7.3e-100 368.2 405 51.1
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 8.0e-99 364.8 361 53.7
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 1.0e-90 337.8 200 87.5
Solyc07g017530.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 6.4e-88 328.6 218 76.1
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 2.4e-87 326.6 199 85.4
CDE09G1393 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 1.1e-82 311.2 221 71.0
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 1.5e-73 280.8 173 81.5
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 1.4e-71 274.2 176 80.1
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 4.7e-67 259.2 202 67.3
ClCG08G005090 Citrullus lanatus HOM05D003653 ORTHO05D004249 2.6e-65 253.4 163 77.9
Nitab4.5_0000055g0040 Nicotiana tabacum HOM05D003653 ORTHO05D004249 2.2e-64 250.4 191 70.7
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 6.4e-64 248.8 427 37.0
SEGI_20709 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.1e-60 238.0 183 65.0
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 4.5e-57 226.1 163 74.2
QL02p096242 Quercus lobata HOM05D003653 ORTHO05D004249 2.7e-54 216.9 178 65.2
BraA02t06914Z Brassica rapa HOM05D003653 ORTHO05D004249 1.4e-50 204.5 148 70.9
RcHm_v2.0_Chr2g0096141 Rosa chinensis HOM05D003653 ORTHO05D004249 1.4e-47 194.5 117 88.0
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 2.5e-44 183.7 117 78.6
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 4.3e-44 183.0 117 78.6
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 3.7e-43 179.9 386 32.1
SEGI_20750 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 6.3e-35 152.5 101 76.2
CiPaw.07G188100 Carya illinoinensis HOM05D003653 ORTHO05D004249 1.8e-29 134.4 113 61.9
ECA232G0158 Erigeron canadensis HOM05D003653 ORTHO05D004249 6.7e-29 132.5 94 70.2
TAR383G0271 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.9e-28 131.0 86 82.6
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-25 121.7 91 70.3
CSS0010583 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.9e-23 114.4 65 86.2
CSS0016569 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 4.6e-22 109.8 63 85.7
SEGI_27322 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.4e-21 108.2 63 82.5
CSS0016294 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 3.8e-16 90.1 73 68.5
Medtr8g018610 Medicago truncatula HOM05D003653 ORTHO05D004249 2.5e-15 87.4 51 82.4
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 4.2e-15 86.7 101 53.5
MBI08_g05369_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 3.9e-13 80.1 55 81.8
MCO01G230 Micromonas commoda HOM05D003653 ORTHO05D004249 3.7e-11 73.6 175 26.9
Dinv02617 Davidia involucrata HOM05D003653 ORTHO05D004249 1.7e-08 64.7 64 60.9
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 5.0e-08 63.2 32 90.6


User provided reference genes

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