Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.8e-70 268.5 135 100.0
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 9.2e-69 263.5 135 97.8
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.1e-29 133.7 115 59.1
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 7.3e-26 120.9 113 53.1
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 2.2e-22 109.4 77 64.9
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.1e-21 107.1 94 52.1
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.9e-21 106.3 94 51.1
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.9e-21 106.3 114 45.6
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.4e-21 105.9 108 48.1
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 5.4e-21 104.8 119 40.3
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 3.0e-19 99.0 96 46.9
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 4.8e-17 91.7 95 43.2
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 6.2e-17 91.3 117 41.9
MSTRG.19633 Avicennia marina HOM05D008138 ORTHO05D010043 3.1e-16 89.0 90 48.9
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 6.9e-16 87.8 92 46.7
Migut.E00266 Erythranthe guttata HOM05D008138 ORTHO05D010043 9.9e-15 84.0 121 41.3
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.2e-14 82.8 99 43.4
Sopen01g005610 Solanum pennellii HOM05D056881 ORTHO05D010043 5.5e-13 78.2 108 35.2
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 2.1e-12 76.3 97 40.2
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 2.7e-12 75.9 108 38.0
Solyc01g010060.2 Solanum lycopersicum HOM05D056881 ORTHO05D010043 4.6e-12 75.1 105 34.3
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 6.0e-12 74.7 122 30.3
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 7.9e-12 74.3 94 38.3
Dinv16586 Davidia involucrata HOM05D008138 ORTHO05D010043 1.0e-11 73.9 115 41.7
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.8e-11 73.2 113 37.2
Migut.E00264 Erythranthe guttata HOM05D008138 ORTHO05D010043 3.9e-11 72.0 127 38.6
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 5.1e-11 71.6 89 37.1
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 6.7e-11 71.2 79 36.7
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.1e-10 70.5 95 35.8
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 1.1e-10 70.5 118 33.9
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 1.5e-10 70.1 91 37.4
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 3.3e-10 68.9 117 33.3
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 4.3e-10 68.6 118 30.5
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 9.6e-10 67.4 83 37.3
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.1e-09 66.2 90 40.0
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 2.1e-09 66.2 86 40.7
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 3.7e-09 65.5 102 32.4
Ciclev10013077m.g Citrus clementina HOM05D008138 ORTHO05D010043 6.2e-09 64.7 85 37.6
Actinidia07751 Actinidia chinensis HOM05D008138 ORTHO05D010043 8.2e-09 64.3 92 41.3
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-08 63.5 97 36.1
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-08 63.5 97 36.1
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-08 63.5 99 36.4
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 1.4e-08 63.5 116 30.2
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.8e-08 63.2 99 36.4
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.3e-08 61.6 98 34.7
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.3e-08 61.6 97 35.1
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 5.3e-08 61.6 101 33.7
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.9e-08 61.2 97 35.1
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 6.9e-08 61.2 86 37.2
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 2.0e-07 59.7 89 36.0
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 2.0e-07 59.7 79 31.6
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.5e-07 58.5 97 34.0
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 4.5e-07 58.5 75 38.7
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.0e-06 57.4 87 35.6
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-06 56.6 83 36.1
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 2.9e-06 55.8 93 29.0
QL10p055147 Quercus lobata HOM05D008138 ORTHO05D010043 4.9e-06 55.1 101 27.7
QL10p055198 Quercus lobata HOM05D008138 ORTHO05D010043 4.9e-06 55.1 125 32.0


User provided reference genes

Program Settings