Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022839 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D006860 9.1e-68 260.0 121 100.0
CSS0002723 Camellia sinensis var. sinensis HOM05D000258 ORTHO05D006860 2.0e-43 179.1 95 87.4
Dinv16805 Davidia involucrata HOM05D000219 ORTHO05D006860 2.1e-40 169.1 82 92.7
Rhsim09G0052100 Rhododendron simsii HOM05D000219 ORTHO05D006860 3.6e-40 168.3 96 81.2
Actinidia35957 Actinidia chinensis HOM05D000219 ORTHO05D006860 4.7e-40 167.9 96 78.1
Hma1.2p1_0057F.1_g032090 Hydrangea macrophylla HOM05D000219 ORTHO05D006860 8.0e-40 167.2 82 90.2
Hma1.2p1_0057F.1_g032100 Hydrangea macrophylla HOM05D000219 ORTHO05D006860 8.0e-40 167.2 82 90.2
Peaxi162Scf00525g00058 Petunia axillaris HOM05D000219 ORTHO05D006860 8.0e-40 167.2 96 80.2
GSVIVG01022421001 Vitis vinifera HOM05D000219 ORTHO05D006860 1.0e-39 166.8 96 78.1
Duzib147G0918 Durio zibethinus HOM05D000219 ORTHO05D006860 6.8e-39 164.1 96 77.1
Gohir.D10G111000 Gossypium hirsutum HOM05D000219 ORTHO05D006860 6.8e-39 164.1 96 75.0
Gorai.011G122400 Gossypium raimondii HOM05D000219 ORTHO05D006860 6.8e-39 164.1 96 75.0
DCAR_006648 Daucus carota HOM05D000219 ORTHO05D006860 8.8e-39 163.7 96 77.1
unitig_62.g23446 Utricularia gibba HOM05D000219 ORTHO05D006860 1.2e-38 163.3 96 76.0
Gohir.A10G154900 Gossypium hirsutum HOM05D000219 ORTHO05D006860 1.5e-38 162.9 96 74.0
HanXRQChr17g0555771 Helianthus annuus HOM05D000219 ORTHO05D006860 2.6e-38 162.2 100 75.0
Cc04_g09500 Coffea canephora HOM05D000219 ORTHO05D006860 3.4e-38 161.8 96 77.1
Solyc05g056540.4 Solanum lycopersicum HOM05D000219 ORTHO05D006860 3.4e-38 161.8 96 78.1
Sopen05g034940 Solanum pennellii HOM05D000219 ORTHO05D006860 3.4e-38 161.8 96 78.1
PGSC0003DMG400023319 Solanum tuberosum HOM05D000219 ORTHO05D006860 3.4e-38 161.8 96 78.1
Manes.13G076700 Manihot esculenta HOM05D000219 ORTHO05D006860 4.4e-38 161.4 96 72.9
Lsat_1_v5_gn_8_133760 Lactuca sativa HOM05D000219 ORTHO05D006860 5.7e-38 161.0 100 75.0
Thecc.01G237700 Theobroma cacao HOM05D000219 ORTHO05D006860 7.5e-38 160.6 96 74.0
EL10Ac4g08974 Beta vulgaris HOM05D000219 ORTHO05D006860 1.3e-37 159.8 96 72.9
Potri.004G138700 Populus trichocarpa HOM05D000219 ORTHO05D006860 1.3e-37 159.8 96 74.0
CiPaw.03G253400 Carya illinoinensis HOM05D000219 ORTHO05D006860 1.7e-37 159.5 96 74.0
ECA232G1898 Erigeron canadensis HOM05D000219 ORTHO05D006860 2.2e-37 159.1 100 74.0
Sc09g0004320 Simmondsia chinensis HOM05D000219 ORTHO05D006860 2.2e-37 159.1 96 75.0
RcHm_v2.0_Chr2g0123611 Rosa chinensis HOM05D000219 ORTHO05D006860 2.8e-37 158.7 96 75.0
Hund22176 Selenicereus undatus HOM05D000219 ORTHO05D006860 2.8e-37 158.7 96 74.0
Atru.chr4.1141 Acer truncatum HOM05D000219 ORTHO05D006860 3.7e-37 158.3 94 78.7
CAN.G1464.10 Capsicum annuum HOM05D000219 ORTHO05D006860 3.7e-37 158.3 96 76.0
ClCG04G003060 Citrullus lanatus HOM05D000219 ORTHO05D006860 4.9e-37 157.9 100 73.0
Migut.H00794 Erythranthe guttata HOM05D000219 ORTHO05D006860 4.9e-37 157.9 96 76.0
AUR62036030 Chenopodium quinoa HOM05D000219 ORTHO05D006860 8.3e-37 157.1 101 67.3
Ah.04g163090 Amaranthus hybridus HOM05D000219 ORTHO05D006860 1.4e-36 156.4 100 71.0
Potri.T010600 Populus trichocarpa HOM05D000219 ORTHO05D006860 1.4e-36 156.4 96 72.9
MSTRG.23502 Avicennia marina HOM05D000219 ORTHO05D006860 1.8e-36 156.0 82 84.1
Cpa.g.sc47.14 Carica papaya HOM05D000219 ORTHO05D006860 1.8e-36 156.0 96 74.0
MELO3C003251.2 Cucumis melo HOM05D000219 ORTHO05D006860 1.8e-36 156.0 100 72.0
CsaV3_4G027540 Cucumis sativus L. HOM05D000219 ORTHO05D006860 1.8e-36 156.0 100 72.0
QL10p038869 Quercus lobata HOM05D000219 ORTHO05D006860 1.8e-36 156.0 82 80.5
Lj4A816G40 Lonicera japonica HOM05D000219 ORTHO05D006860 2.4e-36 155.6 96 71.9
AUR62004811 Chenopodium quinoa HOM05D000219 ORTHO05D006860 3.1e-36 155.2 96 69.8
THA.LOC104800311 Tarenaya hassleriana HOM05D000219 ORTHO05D006860 3.1e-36 155.2 96 71.9
PGR142G1791 Punica granatum HOM05D000219 ORTHO05D006860 4.1e-36 154.8 95 72.6
Ciclev10025619m.g Citrus clementina HOM05D000219 ORTHO05D006860 5.4e-36 154.5 95 74.7
Sed0016333 Sechium edule HOM05D000219 ORTHO05D006860 5.4e-36 154.5 100 69.0
CARHR277500 Cardamine hirsuta HOM05D000219 ORTHO05D006860 9.2e-36 153.7 100 70.0
AL8G40740 Arabidopsis lyrata HOM05D000219 ORTHO05D006860 1.2e-35 153.3 100 70.0
arahy.Tifrunner.gnm1.ann1.4SGX54 Arachis hypogaea HOM05D000219 ORTHO05D006860 1.6e-35 152.9 96 71.9
arahy.Tifrunner.gnm1.ann1.8C4MGB Arachis hypogaea HOM05D000219 ORTHO05D006860 1.6e-35 152.9 96 71.9
TAR362G0321 Trochodendron aralioides HOM05D000219 ORTHO05D006860 1.6e-35 152.9 96 72.9
BcaB02g09744 Brassica carinata HOM05D000219 ORTHO05D006860 2.0e-35 152.5 100 70.0
BcaC01g02616 Brassica carinata HOM05D000219 ORTHO05D006860 2.7e-35 152.1 100 69.0
A06p30240 Brassica napus HOM05D000219 ORTHO05D006860 2.7e-35 152.1 100 69.0
C03p62820 Brassica napus HOM05D000219 ORTHO05D006860 2.7e-35 152.1 100 69.0
BolC3t18536H Brassica oleracea HOM05D000219 ORTHO05D006860 2.7e-35 152.1 100 69.0
BraA06t25973Z Brassica rapa HOM05D000219 ORTHO05D006860 2.7e-35 152.1 100 69.0
Carub.0008s2438 Capsella rubella HOM05D000219 ORTHO05D006860 2.7e-35 152.1 100 70.0
Cfa002239 Carpinus fangiana HOM05D000219 ORTHO05D006860 3.5e-35 151.8 96 70.8
QL10p038963 Quercus lobata HOM05D000219 ORTHO05D006860 3.5e-35 151.8 101 68.3
Sp2g26710 Schrenkiella parvula HOM05D000219 ORTHO05D006860 3.5e-35 151.8 100 69.0
Aa31LG1G18290 Aethionema arabicum HOM05D000219 ORTHO05D006860 4.5e-35 151.4 85 77.6
AT5G63620 Arabidopsis thaliana HOM05D000219 ORTHO05D006860 4.5e-35 151.4 100 69.0
Ca_17594_v3 Cicer arietinum L. HOM05D000219 ORTHO05D006860 4.5e-35 151.4 96 71.9
Haze_25420 Corylus avellana HOM05D000219 ORTHO05D006860 5.9e-35 151.0 96 70.8
Nn1g08449 Nelumbo nucifera HOM05D000219 ORTHO05D006860 5.9e-35 151.0 96 70.8
SHI11417 Sapria himalayana HOM05D000219 ORTHO05D006860 5.9e-35 151.0 100 65.0
TWI79G1643 Tripterygium wilfordii HOM05D000219 ORTHO05D006860 5.9e-35 151.0 96 69.8
CANSAT80G0242 Cannabis sativa HOM05D000219 ORTHO05D006860 7.8e-35 150.6 81 79.0
Thhalv10005729m.g Eutrema salsugineum HOM05D000219 ORTHO05D006860 7.8e-35 150.6 100 68.0
Prupe.4G281800 Prunus persica HOM05D000219 ORTHO05D006860 7.8e-35 150.6 96 69.8
BcaC02g09907 Brassica carinata HOM05D000219 ORTHO05D006860 1.0e-34 150.2 100 69.0
C04p35300 Brassica napus HOM05D000219 ORTHO05D006860 1.0e-34 150.2 100 69.0
BolC4t25084H Brassica oleracea HOM05D000219 ORTHO05D006860 1.0e-34 150.2 100 69.0
FvH4_1g25480 Fragaria vesca HOM05D000219 ORTHO05D006860 1.0e-34 150.2 96 69.8
FAN26G2023 Fragaria x ananassa HOM05D000219 ORTHO05D006860 1.0e-34 150.2 96 69.8
MD00G1129200 Malus domestica HOM05D000219 ORTHO05D006860 1.0e-34 150.2 96 70.8
Glyma.05G197400 Glycine max HOM05D000219 ORTHO05D006860 1.3e-34 149.8 94 74.5
HPP92_003770 Vanilla planifolia HOM05D000219 ORTHO05D006860 1.3e-34 149.8 96 68.8
C08p11440 Brassica napus HOM05D000219 ORTHO05D006860 1.7e-34 149.4 85 75.3
Glyma.08G004800 Glycine max HOM05D000219 ORTHO05D006860 1.7e-34 149.4 82 81.7
Zm00001eb260390 Zea mays HOM05D000219 ORTHO05D006860 1.7e-34 149.4 96 70.8
FAN28G2501 Fragaria x ananassa HOM05D000219 ORTHO05D006860 2.3e-34 149.1 96 69.8
BolC8t48825H Brassica oleracea HOM05D000219 ORTHO05D006860 2.9e-34 148.7 82 78.0
Psat7g041480 Pisum sativum HOM05D000219 ORTHO05D006860 3.8e-34 148.3 96 70.8
VMungo0251G2495 Vigna mungo HOM05D000219 ORTHO05D006860 3.8e-34 148.3 96 69.8
Nitab4.5_0002704g0020 Nicotiana tabacum HOM05D000219 ORTHO05D006860 5.0e-34 147.9 90 76.7
Zm00001eb174190 Zea mays HOM05D000219 ORTHO05D006860 5.0e-34 147.9 96 69.8
Aqoxy5G02644 Aquilegia oxysepala HOM05D000219 ORTHO05D006860 6.6e-34 147.5 96 69.8
BcaC08g44216 Brassica carinata HOM05D000219 ORTHO05D006860 6.6e-34 147.5 80 80.0
Eucgr.I00009 Eucalyptus grandis HOM05D000219 ORTHO05D006860 6.6e-34 147.5 96 69.8
Nitab4.5_0000496g0010 Nicotiana tabacum HOM05D000219 ORTHO05D006860 6.6e-34 147.5 90 76.7
BcaC07g38387 Brassica carinata HOM05D000115 ORTHO05D001535 8.6e-34 147.1 100 66.0
BcaC07g40812 Brassica carinata HOM05D000701 ORTHO05D006860 8.6e-34 147.1 95 69.5
Os08g0109200 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D006860 8.6e-34 147.1 96 68.8
Lalb_Chr07g0184051 Lupinus albus HOM05D000219 ORTHO05D006860 1.5e-33 146.4 96 66.7
Medtr8g095220 Medicago truncatula HOM05D000219 ORTHO05D006860 1.5e-33 146.4 96 70.8
CDE04G0283 Ceratophyllum demersum HOM05D000219 ORTHO05D006860 1.9e-33 146.0 96 69.8
SEGI_24011 Sequoiadendron giganteum HOM05D000219 ORTHO05D006860 1.9e-33 146.0 95 69.5
Phvul.002G277900 Phaseolus vulgaris HOM05D000219 ORTHO05D006860 7.3e-33 144.1 96 68.8
ATR1136G037 Amborella trichopoda HOM05D000219 ORTHO05D006860 9.5e-33 143.7 96 67.7
PSO017G4982 Papaver somniferum HOM05D000219 ORTHO05D006860 9.5e-33 143.7 96 69.8
TPR.G12844 Trifolium pratense HOM05D000219 ORTHO05D006860 9.5e-33 143.7 96 68.8
Lj4g0001086 Lotus japonicus HOM05D000219 ORTHO05D006860 2.1e-32 142.5 96 68.8
ClCG04G003090 Citrullus lanatus HOM05D000219 ORTHO05D006860 4.7e-32 141.4 86 70.9
SMO353G0118 Selaginella moellendorffii HOM05D000219 ORTHO05D006860 7.0e-28 127.5 95 56.8
Pp3c10_670 Physcomitrium patens HOM05D000219 ORTHO05D006860 1.6e-27 126.3 81 67.9
Mapoly0014s0120 Marchantia polymorpha HOM05D000219 ORTHO05D006860 6.6e-26 120.9 96 58.3
Actinidia34630 Actinidia chinensis HOM05D000219 ORTHO05D006860 1.7e-21 106.3 49 91.8
vmacro00498 Vaccinium macrocarpon HOM05D000219 ORTHO05D006860 2.4e-20 102.4 50 88.0
SGA_v2.0_scaffold54G19580 Striga asiatica HOM05D000219 ORTHO05D006860 3.2e-20 102.1 50 88.0
Sabra11G0076100 Salix brachista HOM05D000258 ORTHO05D006860 5.4e-20 101.3 96 55.2
Sabra19G0003100 Salix brachista HOM05D000219 ORTHO05D006860 5.4e-20 101.3 96 55.2
Sabra19G0009100 Salix brachista HOM05D000219 ORTHO05D006860 5.4e-20 101.3 96 55.2
Sabra11G0075600 Salix brachista HOM05D000219 ORTHO05D006860 5.0e-18 94.7 81 58.0
BraA09t36487Z Brassica rapa HOM05D000219 ORTHO05D006860 2.3e-15 85.9 47 78.7
Zm00001eb270900 Zea mays HOM05D000219 ORTHO05D006860 8.3e-13 77.4 57 61.4
BcaB04g19937 Brassica carinata HOM05D000219 ORTHO05D006860 2.8e-08 62.4 31 87.1


User provided reference genes

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