Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 5.6e-77 290.8 141 100.0
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.3e-70 269.6 141 92.2
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.6e-66 253.8 134 90.3
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 6.4e-65 250.8 134 88.8
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 8.4e-65 250.4 141 83.0
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.2e-64 248.4 141 83.0
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.2e-64 248.4 135 85.2
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 2.1e-63 245.7 138 81.2
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 6.0e-63 244.2 136 86.0
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 7.8e-63 243.8 136 83.1
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.0e-62 243.4 135 83.7
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.3e-62 242.3 136 83.1
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.0e-62 241.9 136 82.4
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 3.0e-62 241.9 136 84.6
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 6.6e-62 240.7 140 82.1
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.6e-62 240.7 136 82.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 8.7e-62 240.4 122 94.3
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 8.7e-62 240.4 139 81.3
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.1e-61 240.0 140 80.0
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.1e-61 240.0 139 81.3
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 3.3e-61 238.4 138 79.0
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.6e-60 236.1 132 84.1
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 2.1e-60 235.7 135 81.5
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 2.1e-60 235.7 133 82.0
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.8e-60 235.3 138 79.7
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.6e-60 235.0 141 78.7
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.8e-60 234.6 136 80.1
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 8.1e-60 233.8 134 79.1
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.1e-59 233.4 138 78.3
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.1e-59 233.4 136 82.4
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.8e-59 232.6 136 78.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.4e-59 232.3 120 90.8
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 9.0e-59 230.3 135 80.7
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 2.6e-58 228.8 136 79.4
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 2.6e-58 228.8 141 77.3
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 3.4e-58 228.4 135 77.0
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 4.5e-58 228.0 136 78.7
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 4.5e-58 228.0 138 74.6
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 5.8e-58 227.6 137 77.4
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 7.6e-58 227.3 136 80.9
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.3e-57 226.5 138 79.7
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.7e-57 226.1 136 74.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.2e-57 225.7 136 76.5
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.9e-57 225.3 137 76.6
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 3.8e-57 224.9 136 74.3
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 3.8e-57 224.9 138 78.3
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 3.8e-57 224.9 138 73.2
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 4.9e-57 224.6 141 74.5
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 4.9e-57 224.6 133 75.2
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 6.4e-57 224.2 136 78.7
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.1e-56 223.4 137 74.5
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.1e-56 223.4 135 77.0
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.1e-56 223.4 135 77.0
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.9e-56 222.6 136 75.7
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.4e-56 222.2 138 78.3
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 2.4e-56 222.2 136 77.9
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.4e-56 222.2 133 74.4
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 3.2e-56 221.9 136 79.4
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 3.2e-56 221.9 135 80.0
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 5.4e-56 221.1 142 75.4
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 7.1e-56 220.7 139 71.9
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.2e-55 219.9 138 78.3
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.1e-55 219.2 136 74.3
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 2.7e-55 218.8 132 76.5
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 3.5e-55 218.4 136 76.5
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 6.0e-55 217.6 137 75.2
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 6.0e-55 217.6 137 75.2
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 6.0e-55 217.6 141 74.5
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.0e-54 216.9 138 76.8
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 5.1e-54 214.5 138 71.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.9e-53 212.6 136 70.6
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.5e-53 212.2 136 75.7
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.6e-53 210.3 127 76.4
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.6e-53 210.3 127 76.4
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 4.8e-52 208.0 140 72.1
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.8e-51 206.1 134 70.9
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.8e-51 206.1 134 70.9
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.4e-51 205.7 136 69.9
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 2.4e-51 205.7 106 87.7
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 5.3e-51 204.5 134 70.1
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 9.0e-51 203.8 121 80.2
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 9.0e-51 203.8 121 80.2
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.2e-50 203.4 136 68.4
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 2.6e-50 202.2 134 68.7
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.6e-50 202.2 140 67.1
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 3.4e-50 201.8 136 70.6
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 5.8e-50 201.1 121 79.3
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 9.9e-50 200.3 134 70.1
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 9.9e-50 200.3 135 70.4
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-49 199.9 137 69.3
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.7e-49 199.5 138 68.1
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.2e-49 199.1 138 68.8
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.2e-49 199.1 136 69.9
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 3.8e-49 198.4 119 77.3
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 6.4e-49 197.6 137 68.6
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.4e-48 196.4 119 76.5
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.4e-48 196.4 141 68.8
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.9e-48 196.1 135 68.1
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 4.2e-48 194.9 134 68.7
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 9.3e-48 193.7 137 67.9
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.6e-47 193.0 137 67.2
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 2.1e-47 192.6 137 67.2
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.0e-47 191.0 116 77.6
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 6.0e-47 191.0 138 63.0
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.8e-46 189.5 130 70.8
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 5.1e-46 188.0 136 64.7
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 6.7e-46 187.6 140 63.6
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 7.4e-45 184.1 132 65.9
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 9.6e-45 183.7 138 65.9
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.1e-44 182.6 110 77.3
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 5.3e-43 177.9 116 69.0
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 6.9e-43 177.6 125 69.6
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.5e-42 176.4 108 76.9
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 5.8e-42 174.5 131 65.6
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.1e-35 153.7 134 52.2
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 6.9e-35 151.0 109 66.1
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.2e-34 150.2 129 53.5
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.5e-34 149.8 123 56.1
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.5e-34 149.8 120 54.2
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.5e-34 149.8 98 71.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 2.0e-34 149.4 116 56.9
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.4e-34 148.7 98 70.4
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 5.9e-34 147.9 131 52.7
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 7.6e-34 147.5 92 73.9
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.2e-33 146.0 115 58.3
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.8e-30 136.3 86 72.1
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.1e-29 133.7 85 70.6
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 9.1e-27 124.0 90 67.8
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 3.4e-26 122.1 122 45.9
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.0e-18 96.3 73 64.4
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 9.4e-16 87.4 90 53.3
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.7e-09 66.6 43 69.8
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 2.3e-06 56.2 43 58.1


User provided reference genes

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