Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022799 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 2.1e-132 475.7 245 100.0
CSS0007717 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 4.3e-101 371.7 275 72.0
CSS0039970 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 3.1e-91 339.0 205 84.4
CSS0044296 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D014695 3.8e-49 199.1 118 84.7
CSS0033172 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 5.0e-33 145.6 90 86.7
CSS0041386 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 2.3e-17 93.6 140 47.9
CSS0035156 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 3.0e-17 93.2 140 48.6
Hma1.2p1_1373F.1_g278750 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 3.9e-17 92.8 136 41.9
Hma1.2p1_2663F.1_g326426 Hydrangea macrophylla HOM05D000101 ORTHO05D014695 3.9e-17 92.8 136 41.9
Hma1.2p1_0435F.1_g152390 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 5.1e-17 92.4 133 42.9
Hma1.2p1_0435F.1_g152400 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 3.6e-15 86.3 136 39.0
vmacro04727 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 3.4e-13 79.7 125 37.6
Hma1.2p1_1051F.1_g252060 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 1.7e-12 77.4 136 39.0
Atru.chr2.1124 Acer truncatum HOM05D000101 ORTHO05D014695 3.8e-12 76.3 134 41.0
vmacro16169 Vaccinium macrocarpon HOM05D000101 ORTHO05D000089 3.8e-12 76.3 124 38.7
Oeu042917.1 Olea europaea HOM05D000101 ORTHO05D000089 4.9e-12 75.9 133 33.8
Ciclev10010335m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.4e-12 75.1 110 38.2
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 8.4e-12 75.1 136 38.2
Rhsim11G0147100 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.4e-11 74.3 135 35.6
Dinv29323 Davidia involucrata HOM05D000101 ORTHO05D000089 7.1e-11 72.0 103 40.8
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 9.3e-11 71.6 103 40.8
Rhsim11G0146400 Rhododendron simsii HOM05D004882 ORTHO05D000089 1.2e-10 71.2 124 36.3
Thecc.07G077700 Theobroma cacao HOM05D000101 ORTHO05D000089 2.7e-10 70.1 132 31.8
Duzib213G0389 Durio zibethinus HOM05D000101 ORTHO05D000089 3.5e-10 69.7 133 33.8
Ciclev10007349m.g Citrus clementina HOM05D000101 ORTHO05D000089 4.6e-10 69.3 114 36.8
Ciclev10027440m.g Citrus clementina HOM05D000101 ORTHO05D000089 4.6e-10 69.3 110 36.4
MBI18_g07589_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D006096 4.6e-10 69.3 109 37.6
Dinv29328 Davidia involucrata HOM05D000101 ORTHO05D000089 6.0e-10 68.9 103 39.8
Cfa020510 Carpinus fangiana HOM05D000101 ORTHO05D000089 1.3e-09 67.8 133 31.6
Duzib213G1018 Durio zibethinus HOM05D000101 ORTHO05D000089 1.3e-09 67.8 133 33.8
QL12p023483 Quercus lobata HOM05D000101 ORTHO05D000089 1.3e-09 67.8 135 34.1
Actinidia18750 Actinidia chinensis HOM05D000101 ORTHO05D000089 1.7e-09 67.4 133 31.6
Duzib238G0002 Durio zibethinus HOM05D000101 ORTHO05D000089 1.7e-09 67.4 133 31.6
MBI02_g35906_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.7e-09 67.4 119 31.9
Thecc.03G040300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.7e-09 67.4 103 39.8
EL10Ac4g08089 Beta vulgaris HOM05D000101 ORTHO05D000089 2.3e-09 67.0 109 33.9
QL08p019038 Quercus lobata HOM05D000101 ORTHO05D000089 2.3e-09 67.0 107 35.5
Ciclev10024817m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.0e-09 66.6 110 36.4
MBI11_g13896_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.0e-09 66.6 133 30.8
MBI11_g42046_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.0e-09 66.6 133 30.8
Thecc.07G072600 Theobroma cacao HOM05D000101 ORTHO05D000089 3.9e-09 66.2 135 31.9
Ah.06g183650 Amaranthus hybridus HOM05D000101 ORTHO05D000089 5.1e-09 65.9 110 31.8
QL05p077009 Quercus lobata HOM05D000101 ORTHO05D000089 5.1e-09 65.9 135 33.3
CSS0008325 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 6.6e-09 65.5 136 33.8
Ciclev10027601m.g Citrus clementina HOM05D000101 ORTHO05D000089 6.6e-09 65.5 103 35.9
Rhsim04G0017900 Rhododendron simsii HOM05D000101 ORTHO05D000089 6.6e-09 65.5 112 35.7
Duzib268G1835 Durio zibethinus HOM05D000101 ORTHO05D000089 1.1e-08 64.7 133 31.6
QL09p032708 Quercus lobata HOM05D000101 ORTHO05D000089 1.1e-08 64.7 111 37.8
Atru.chr2.2797 Acer truncatum HOM05D000101 ORTHO05D000089 1.5e-08 64.3 129 31.8
Rhsim09G0132900 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.5e-08 64.3 89 41.6
Rhsim11G0119000 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.5e-08 64.3 134 36.6
Thecc.07G078600 Theobroma cacao HOM05D000101 ORTHO05D000089 1.5e-08 64.3 133 32.3
MBI11_g25048_MAGBIO Magnolia biondii HOM05D018314 ORTHO05D014695 1.9e-08 63.9 100 37.0
Ciclev10026931m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.5e-08 63.5 133 30.1
Haze_09523 Corylus avellana HOM05D000101 ORTHO05D000089 2.5e-08 63.5 103 37.9
Duzib268G0039 Durio zibethinus HOM05D000101 ORTHO05D000089 2.5e-08 63.5 133 32.3
MBI11_g05438_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.5e-08 63.5 104 33.7
Ciclev10024821m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.3e-08 63.2 111 35.1
MBI11_g25856_MAGBIO Magnolia biondii HOM05D001013 ORTHO05D001703 4.3e-08 62.8 129 32.6
Dinv00143 Davidia involucrata HOM05D000101 ORTHO05D000089 5.6e-08 62.4 98 35.7
Dinv19546 Davidia involucrata HOM05D000101 ORTHO05D000089 7.3e-08 62.0 98 34.7
Duzib187G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 7.3e-08 62.0 138 31.9
Gohir.A11G285400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 7.3e-08 62.0 132 31.1
QL02p080444 Quercus lobata HOM05D000101 ORTHO05D000089 7.3e-08 62.0 108 33.3
QL08p018598 Quercus lobata HOM05D000101 ORTHO05D000089 7.3e-08 62.0 133 30.1
CSS0004355 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 9.6e-08 61.6 138 31.9
PGR031G0716 Punica granatum HOM05D000101 ORTHO05D000089 9.6e-08 61.6 136 29.4
Thecc.07G078200 Theobroma cacao HOM05D000101 ORTHO05D000089 9.6e-08 61.6 137 30.7
Duzib268G1134 Durio zibethinus HOM05D000101 ORTHO05D000089 1.3e-07 61.2 133 31.6
Gohir.D11G294500 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.3e-07 61.2 135 30.4
Gohir.D11G296616 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.3e-07 61.2 133 30.1
Gorai.007G317700 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.3e-07 61.2 135 30.4
Gorai.007G319900 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.3e-07 61.2 133 30.1
QL93p2023_0071 Quercus lobata HOM05D000101 ORTHO05D000089 1.3e-07 61.2 133 30.1
COL.COLO4_09471 Corchorus olitorius HOM05D000101 ORTHO05D000089 1.6e-07 60.8 104 35.6
MBI11_g25854_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.6e-07 60.8 130 29.2
Thecc.07G072400 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-07 60.8 133 32.3
CiPaw.09G122200 Carya illinoinensis HOM05D000101 ORTHO05D000089 2.1e-07 60.5 109 28.4
Dinv02505 Davidia involucrata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 98 31.6
Dinv19549 Davidia involucrata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 98 31.6
MBI11_g05452_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.1e-07 60.5 102 29.4
QL05p000733 Quercus lobata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 135 31.9
QL05p000741 Quercus lobata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 135 31.9
QL05p000767 Quercus lobata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 135 31.9
QL08p018201 Quercus lobata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 132 29.5
QL08p018687 Quercus lobata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 133 30.1
Atru.chr2.2804 Acer truncatum HOM05D000101 ORTHO05D000089 2.8e-07 60.1 132 30.3
MBI11_g05440_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.8e-07 60.1 96 34.4
Oeu059280.1 Olea europaea HOM05D000101 ORTHO05D000089 2.8e-07 60.1 113 32.7
MBI11_g25849_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.6e-07 59.7 133 31.6
MBI11_g03776_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.8e-07 59.3 121 29.8
AUR62029339 Chenopodium quinoa HOM05D000101 ORTHO05D000089 6.2e-07 58.9 99 29.3
Dinv10264 Davidia involucrata HOM05D000101 ORTHO05D000089 6.2e-07 58.9 99 35.4
Duzib170G0171 Durio zibethinus HOM05D000101 ORTHO05D000089 6.2e-07 58.9 133 28.6
Duzib213G1056 Durio zibethinus HOM05D000101 ORTHO05D000089 6.2e-07 58.9 133 28.6
Rhsim11G0147000 Rhododendron simsii HOM05D018314 ORTHO05D014695 6.2e-07 58.9 117 34.2
Thecc.07G057800 Theobroma cacao HOM05D000101 ORTHO05D000089 6.2e-07 58.9 133 28.6
Thecc.07G078900 Theobroma cacao HOM05D000101 ORTHO05D000089 6.2e-07 58.9 131 30.5
Gohir.D11G296640 Gossypium hirsutum HOM05D000101 ORTHO05D000089 8.1e-07 58.5 133 28.6
MBI11_g25045_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.1e-06 58.2 124 33.9
QL08p018373 Quercus lobata HOM05D000101 ORTHO05D000089 1.1e-06 58.2 138 29.7
Thecc.07G078100 Theobroma cacao HOM05D000101 ORTHO05D000089 1.1e-06 58.2 99 36.4
Thecc.07G078300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.1e-06 58.2 133 31.6
Gohir.D11G296632 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.4e-06 57.8 133 28.6
MBI11_g25852_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.4e-06 57.8 86 33.7
Thecc.07G072300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.4e-06 57.8 133 30.1
Thecc.07G078500 Theobroma cacao HOM05D000101 ORTHO05D000089 1.4e-06 57.8 99 38.4
Ciclev10024814m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.8e-06 57.4 104 35.6
Gorai.007G320300 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.8e-06 57.4 133 27.8
MBI11_g31295_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.8e-06 57.4 95 29.5
QL01p032883 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 57.4 136 28.7
MBI11_g05461_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.4e-06 57.0 130 26.2
MBI18_g24213_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.4e-06 57.0 108 30.6
Sopen02g011950 Solanum pennellii HOM05D000101 ORTHO05D000089 2.4e-06 57.0 131 28.2
Thecc.07G137200 Theobroma cacao HOM05D000101 ORTHO05D000089 2.4e-06 57.0 133 30.8
MBI11_g05444_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 3.1e-06 56.6 133 28.6
Actinidia05169 Actinidia chinensis HOM05D000101 ORTHO05D000089 4.0e-06 56.2 130 27.7
Ciclev10024820m.g Citrus clementina HOM05D000101 ORTHO05D000089 4.0e-06 56.2 104 34.6
Dinv01411 Davidia involucrata HOM05D000101 ORTHO05D000089 4.0e-06 56.2 103 33.0
Gorai.007G320100 Gossypium raimondii HOM05D000101 ORTHO05D000089 4.0e-06 56.2 133 27.8
QL08p018668 Quercus lobata HOM05D000101 ORTHO05D000089 4.0e-06 56.2 131 29.0
Dinv15030 Davidia involucrata HOM05D000101 ORTHO05D000089 6.9e-06 55.5 103 32.0
Dinv24616 Davidia involucrata HOM05D000101 ORTHO05D000089 6.9e-06 55.5 103 33.0
HanXRQChr02g0046161 Helianthus annuus HOM05D000101 ORTHO05D000089 6.9e-06 55.5 111 27.0
MBI11_g45545_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D014695 6.9e-06 55.5 90 31.1
MBI18_g07566_MAGBIO Magnolia biondii HOM05D018314 ORTHO05D013107 6.9e-06 55.5 104 32.7
Oeu042885.1 Olea europaea HOM05D007843 ORTHO05D003639 6.9e-06 55.5 101 32.7
QL08p018363 Quercus lobata HOM05D000101 ORTHO05D000089 6.9e-06 55.5 113 30.1
Solyc02g037540.3 Solanum lycopersicum HOM05D000101 ORTHO05D000089 6.9e-06 55.5 95 34.7
COL.COLO4_16254 Corchorus olitorius HOM05D000101 ORTHO05D000089 9.0e-06 55.1 80 38.8
Dinv07876 Davidia involucrata HOM05D000101 ORTHO05D000089 9.0e-06 55.1 99 33.3
MBI11_g07702_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 9.0e-06 55.1 97 32.0


User provided reference genes

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