Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022724 Camellia sinensis var. sinensis HOM05D067956 ORTHO05D111151 1.8e-30 135.2 66 100.0
CSS0039037 Camellia sinensis var. sinensis HOM05D067956 ORTHO05D109396 2.7e-29 131.3 66 98.5
Nitab4.5_0003436g0140 Nicotiana tabacum HOM05D000230 ORTHO05D000176 1.3e-07 59.3 51 54.9
Ciclev10014530m.g Citrus clementina HOM05D000230 ORTHO05D000176 3.7e-07 57.8 30 90.0
Thecc.09G217000 Theobroma cacao HOM05D000230 ORTHO05D000176 6.4e-07 57.0 30 86.7
SHI30481 Sapria himalayana HOM05D000230 ORTHO05D000176 8.3e-07 56.6 31 83.9
Duzib168G1855 Durio zibethinus HOM05D000230 ORTHO05D000176 1.1e-06 56.2 30 86.7
Atru.chr3.2120 Acer truncatum HOM05D000230 ORTHO05D000176 1.4e-06 55.8 30 83.3
Atru.chr3.2121 Acer truncatum HOM05D000230 ORTHO05D000176 1.4e-06 55.8 30 83.3
Aqoxy2G00054 Aquilegia oxysepala HOM05D000230 ORTHO05D000176 1.9e-06 55.5 30 83.3
Nitab4.5_0005041g0040 Nicotiana tabacum HOM05D000230 ORTHO05D000176 1.9e-06 55.5 31 83.9
QL01p009880 Quercus lobata HOM05D000230 ORTHO05D000176 2.4e-06 55.1 39 66.7
Oeu058543.1 Olea europaea HOM05D000230 ORTHO05D000176 3.2e-06 54.7 31 80.6
SEGI_36268 Sequoiadendron giganteum HOM05D000230 ORTHO05D000176 3.2e-06 54.7 30 80.0
FvH4_3g44320 Fragaria vesca HOM05D000230 ORTHO05D000176 4.1e-06 54.3 31 83.9
FAN11G1332 Fragaria x ananassa HOM05D000230 ORTHO05D000176 4.1e-06 54.3 31 83.9
FAN16G0763 Fragaria x ananassa HOM05D000230 ORTHO05D000176 4.1e-06 54.3 31 83.9
FAN25G2157 Fragaria x ananassa HOM05D000230 ORTHO05D000176 4.1e-06 54.3 31 83.9
TAR636G2721 Trochodendron aralioides HOM05D000230 ORTHO05D000176 4.1e-06 54.3 30 83.3
A03p35120 Brassica napus HOM05D000230 ORTHO05D000176 5.4e-06 53.9 30 80.0
C03p42710 Brassica napus HOM05D000230 ORTHO05D000176 5.4e-06 53.9 30 80.0
BolC3t16541H Brassica oleracea HOM05D000230 ORTHO05D000176 5.4e-06 53.9 30 80.0
BraA03t12692Z Brassica rapa HOM05D000230 ORTHO05D000176 5.4e-06 53.9 30 80.0
TWI60G0944 Tripterygium wilfordii HOM05D000230 ORTHO05D000176 5.4e-06 53.9 31 77.4
Lj5g0013786 Lotus japonicus HOM05D000230 ORTHO05D000176 7.0e-06 53.5 30 80.0
Rhsim13G0227300 Rhododendron simsii HOM05D000230 ORTHO05D000176 7.0e-06 53.5 30 83.3
Cpa.g.sc973.1 Carica papaya HOM05D000230 ORTHO05D000176 9.2e-06 53.1 30 73.3
Gohir.A08G012400 Gossypium hirsutum HOM05D000230 ORTHO05D000176 9.2e-06 53.1 30 80.0
Gohir.D08G023000 Gossypium hirsutum HOM05D000230 ORTHO05D000176 9.2e-06 53.1 30 80.0
Gorai.004G018200 Gossypium raimondii HOM05D000230 ORTHO05D000176 9.2e-06 53.1 30 80.0
Nn7g36008 Nelumbo nucifera HOM05D000230 ORTHO05D000176 9.2e-06 53.1 30 83.3
Potri.001G011900 Populus trichocarpa HOM05D000230 ORTHO05D000176 9.2e-06 53.1 30 80.0


User provided reference genes

Program Settings