Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022702 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 9.6e-35 149.8 88 100.0
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.5e-14 82.0 88 60.2
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.5e-14 82.0 88 60.2
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 9.4e-14 80.1 88 61.4
CSS0008657 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 6.1e-13 77.4 88 55.7
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 1.0e-12 76.6 88 54.5
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 5.1e-12 74.3 88 56.8
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 3.3e-11 71.6 88 51.1
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.3e-11 71.6 88 51.1
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.3e-11 71.6 88 51.1
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 4.3e-11 71.2 88 50.0
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 4.3e-11 71.2 88 50.0
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 4.3e-11 71.2 88 50.0
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 5.7e-11 70.9 88 53.4
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 7.4e-11 70.5 88 53.4
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.3e-10 69.7 52 75.0
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 1.3e-10 69.7 87 50.6
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 1.3e-10 69.7 87 50.6
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 1.3e-10 69.7 88 48.9
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 1.7e-10 69.3 88 47.7
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 1.7e-10 69.3 88 52.3
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 1.7e-10 69.3 88 52.3
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 1.7e-10 69.3 88 52.3
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.7e-10 69.3 87 52.9
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 2.2e-10 68.9 88 48.9
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 2.8e-10 68.6 87 51.7
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 2.8e-10 68.6 88 46.6
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 3.7e-10 68.2 88 51.1
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.7e-10 68.2 88 48.9
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 3.7e-10 68.2 87 49.4
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 3.7e-10 68.2 88 48.9
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 3.7e-10 68.2 88 48.9
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 3.7e-10 68.2 86 48.8
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 3.7e-10 68.2 88 48.9
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 4.8e-10 67.8 88 48.9
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 4.8e-10 67.8 88 47.7
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 4.8e-10 67.8 88 48.9
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 6.3e-10 67.4 88 50.0
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 6.3e-10 67.4 88 51.1
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 6.3e-10 67.4 87 50.6
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 6.3e-10 67.4 88 50.0
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 8.2e-10 67.0 88 45.5
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 1.1e-09 66.6 88 48.9
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.4e-09 66.2 88 51.1
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 1.4e-09 66.2 88 47.7
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 1.4e-09 66.2 88 48.9
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 1.4e-09 66.2 88 46.6
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 1.4e-09 66.2 88 51.1
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 1.8e-09 65.9 88 50.0
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 1.8e-09 65.9 88 47.7
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 1.8e-09 65.9 88 47.7
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 1.8e-09 65.9 87 49.4
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 2.4e-09 65.5 87 51.7
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 4.1e-09 64.7 87 47.1
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 5.3e-09 64.3 87 47.1
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 5.3e-09 64.3 88 50.0
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 6.9e-09 63.9 87 46.0
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 6.9e-09 63.9 88 46.6
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 6.9e-09 63.9 88 47.7
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 6.9e-09 63.9 87 48.3
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 6.9e-09 63.9 87 50.6
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 6.9e-09 63.9 87 49.4
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 9.1e-09 63.5 87 46.0
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 9.1e-09 63.5 88 50.0
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 2.0e-08 62.4 87 47.1
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 2.0e-08 62.4 87 49.4
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 2.0e-08 62.4 87 47.1
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 2.6e-08 62.0 88 48.9
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 2.6e-08 62.0 87 44.8
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 2.6e-08 62.0 87 46.0
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 3.4e-08 61.6 87 44.8
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 4.5e-08 61.2 87 44.8
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 4.5e-08 61.2 87 44.8
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 5.9e-08 60.8 88 45.5
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 1.3e-07 59.7 87 43.7
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 1.3e-07 59.7 87 43.7
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.7e-07 59.3 51 66.7
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 1.7e-07 59.3 87 46.0
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 2.2e-07 58.9 87 43.7
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 2.9e-07 58.5 87 43.7
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 2.9e-07 58.5 87 44.8
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 2.9e-07 58.5 88 45.5
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 3.8e-07 58.2 88 45.5
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 3.8e-07 58.2 87 43.7
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 3.8e-07 58.2 87 43.7
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 3.8e-07 58.2 87 43.7
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 3.8e-07 58.2 87 43.7
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 3.8e-07 58.2 87 44.8
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 3.8e-07 58.2 87 44.8
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 5.0e-07 57.8 87 43.7
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 6.5e-07 57.4 88 46.6
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 8.5e-07 57.0 87 43.7
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 1.4e-06 56.2 88 45.5
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 1.4e-06 56.2 88 45.5
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 1.4e-06 56.2 88 45.5
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 1.4e-06 56.2 51 62.7
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 2.5e-06 55.5 87 42.5
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 2.5e-06 55.5 88 45.5
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 2.5e-06 55.5 72 48.6
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 5.5e-06 54.3 88 43.2
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 7.2e-06 53.9 87 41.4
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 9.4e-06 53.5 88 42.0


User provided reference genes

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