Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022694 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.2e-112 409.8 197 100.0
CSS0032909 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 3.2e-70 268.9 154 85.1
CSS0038915 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 2.5e-67 259.2 144 86.1
CSS0015501 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.8e-65 253.1 198 67.7
CSS0037956 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 1.8e-65 253.1 144 86.8
CSS0011986 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 4.0e-65 251.9 198 67.7
CSS0049266 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 4.3e-35 152.1 97 79.4
CSS0027355 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 3.9e-28 129.0 83 77.1
CSS0023844 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 8.8e-28 127.9 76 82.9
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 7.4e-27 124.8 118 59.3
CSS0036654 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 2.8e-26 122.9 76 80.3
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-19 100.5 135 48.1
CSS0038779 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 7.7e-16 88.2 45 91.1
CSS0041104 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 7.7e-16 88.2 45 91.1
CSS0020478 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D112776 8.0e-13 78.2 64 64.1
CiPaw.16G093000 Carya illinoinensis HOM05D000339 ORTHO05D000212 8.2e-10 68.2 49 67.3
Gohir.A01G151300 Gossypium hirsutum HOM05D000339 ORTHO05D000212 1.2e-08 64.3 51 62.7
CSS0006929 Camellia sinensis var. sinensis HOM05D021377 ORTHO05D110794 2.6e-08 63.2 158 33.5
CSS0009726 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 1.7e-07 60.5 68 52.9
Dinv14418 Davidia involucrata HOM05D000339 ORTHO05D000212 3.8e-07 59.3 45 60.0
Lalb_Chr14g0370731 Lupinus albus HOM05D000339 ORTHO05D000212 3.8e-07 59.3 61 57.4
SGA_v2.0_scaffold234G43613 Striga asiatica HOM05D000339 ORTHO05D000212 6.5e-07 58.5 87 40.2
CSS0023556 Camellia sinensis var. sinensis HOM05D000339 ORTHO05D000212 1.1e-06 57.8 46 65.2
Cpa.g.sc65.159 Carica papaya HOM05D000339 ORTHO05D000212 1.5e-06 57.4 44 65.9
Sed0005608 Sechium edule HOM05D000339 ORTHO05D000212 1.5e-06 57.4 79 44.3
Duzib251G0913 Durio zibethinus HOM05D000339 ORTHO05D000212 1.9e-06 57.0 46 63.0
Thecc.02G283500 Theobroma cacao HOM05D000339 ORTHO05D000212 1.9e-06 57.0 44 63.6
MSTRG.2161 Avicennia marina HOM05D000339 ORTHO05D000212 2.5e-06 56.6 73 42.5
Atru.chr9.1742 Acer truncatum HOM05D000339 ORTHO05D000212 5.5e-06 55.5 54 57.4
GSVIVG01008424001 Vitis vinifera HOM05D000339 ORTHO05D000212 7.2e-06 55.1 45 64.4


User provided reference genes

Program Settings