Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 5.4e-153 544.3 271 100.0
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 3.9e-119 431.8 273 78.4
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.2e-112 410.2 273 76.6
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 2.7e-112 409.1 274 75.9
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 7.9e-112 407.5 279 76.0
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 2.3e-111 406.0 273 75.1
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 8.7e-111 404.1 273 74.7
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 3.3e-110 402.1 280 73.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 4.3e-110 401.7 273 74.4
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 4.3e-110 401.7 276 75.0
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 5.6e-110 401.4 279 74.9
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 7.4e-110 401.0 279 74.6
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 9.6e-110 400.6 279 73.8
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 4.8e-109 398.3 276 72.5
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 6.2e-109 397.9 274 75.5
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 8.2e-109 397.5 261 78.5
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 5.3e-108 394.8 277 73.6
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 6.9e-108 394.4 273 74.4
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 9.0e-108 394.0 278 72.7
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 9.0e-108 394.0 277 72.9
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.5e-107 393.3 278 71.9
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 7.6e-107 391.0 275 73.5
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 7.6e-107 391.0 274 73.0
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.0e-106 390.6 272 74.6
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.2e-106 389.4 274 73.7
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.9e-106 388.3 278 71.2
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 6.5e-106 387.9 274 74.5
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 8.4e-106 387.5 274 75.2
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 8.4e-106 387.5 271 73.1
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.4e-105 386.7 275 72.0
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.5e-105 386.0 271 73.1
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 5.5e-105 384.8 273 72.2
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 1.2e-104 383.6 302 67.9
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 3.5e-104 382.1 280 71.1
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 3.5e-104 382.1 281 71.5
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 3.5e-104 382.1 276 70.7
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 4.6e-104 381.7 267 73.8
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 6.0e-104 381.3 274 72.6
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 6.0e-104 381.3 274 72.3
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 1.0e-103 380.6 275 71.6
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 5.1e-103 378.3 275 72.7
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 6.7e-103 377.9 284 67.6
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.1e-102 377.1 271 70.1
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.5e-102 375.9 275 71.3
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 3.3e-102 375.6 273 70.0
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 4.3e-102 375.2 283 69.3
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 4.3e-102 375.2 277 68.6
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 9.7e-102 374.0 268 73.5
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-101 373.6 282 69.9
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.4e-100 370.2 272 71.0
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.8e-100 369.8 300 65.7
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 4.1e-100 368.6 280 70.4
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.5e-99 366.7 275 68.4
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 2.0e-99 366.3 263 69.2
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 3.4e-99 365.5 277 69.0
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.0e-98 364.0 283 68.9
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.3e-98 363.6 277 71.5
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.1e-97 360.5 202 85.1
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.1e-97 360.5 274 67.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.4e-97 360.1 280 67.5
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 1.9e-97 359.8 202 85.6
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 3.2e-97 359.0 275 68.7
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 3.2e-97 359.0 279 68.1
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 4.2e-97 358.6 279 68.5
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.1e-96 356.3 280 68.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.7e-96 355.9 208 84.1
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.0e-95 354.0 281 66.9
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 3.0e-95 352.4 269 66.9
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 1.1e-94 350.5 202 83.7
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.5e-94 349.4 271 66.1
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 5.7e-94 348.2 271 67.5
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 7.4e-94 347.8 228 74.1
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 7.4e-94 347.8 228 74.1
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 9.7e-94 347.4 270 65.9
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 9.7e-94 347.4 269 67.7
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.3e-93 347.1 272 66.5
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.3e-93 347.1 272 66.5
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.7e-93 346.7 236 71.6
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 2.8e-93 345.9 269 66.9
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.1e-92 344.0 279 65.6
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.4e-92 343.6 202 80.7
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 5.3e-92 341.7 202 82.2
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.9e-92 341.3 264 67.8
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 3.4e-91 339.0 269 66.5
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 5.9e-91 338.2 275 65.5
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 6.5e-90 334.7 278 61.9
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 3.2e-89 332.4 255 67.5
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 4.7e-88 328.6 209 78.5
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.0e-87 327.4 202 76.7
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.3e-87 326.2 266 66.9
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 3.0e-87 325.9 283 63.6
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 3.0e-87 325.9 235 68.9
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.1e-87 325.1 268 65.3
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 2.0e-86 323.2 204 77.5
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 2.6e-86 322.8 229 70.3
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 9.1e-84 314.3 275 60.0
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 9.1e-84 314.3 178 86.5
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.2e-80 303.9 216 70.4
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.5e-78 297.0 220 67.3
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 2.4e-76 289.7 222 65.8
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 4.1e-76 288.9 273 59.0
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 7.0e-76 288.1 200 71.0
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 7.7e-75 284.6 277 58.5
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 2.4e-68 263.1 175 70.9
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.2e-67 260.8 217 61.3
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.7e-67 259.6 282 56.7
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 3.5e-67 259.2 199 63.8
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 2.9e-66 256.1 157 79.0
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 2.1e-64 250.0 156 80.1
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.0e-63 247.7 244 59.4
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.7e-61 240.4 226 54.9
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.0e-59 233.4 202 58.9
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 5.9e-59 231.9 116 96.6
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.3e-58 230.7 219 55.3
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 8.6e-58 228.0 231 51.5
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.2e-51 207.6 210 51.9
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 1.4e-47 194.1 174 61.5
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 3.2e-44 183.0 112 78.6
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.0e-42 175.6 200 52.0
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.3e-25 119.8 81 69.1
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.2e-24 117.9 185 41.1
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 2.8e-08 63.5 58 56.9
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.4e-07 61.2 34 82.4
Prupe.6G248300 Prunus persica HOM05D006631 ORTHO05D334351 2.6e-06 57.0 44 68.2


User provided reference genes

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