Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022662 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 6.5e-19 96.7 59 100.0
CSS0011241 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 2.3e-16 88.2 59 86.4
CSS0036301 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 5.7e-15 83.6 59 83.1
CSS0022867 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 7.4e-15 83.2 59 83.1
Hma1.2p1_0293F.1_g116270 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 2.1e-09 65.1 64 60.9
Potri.006G056200 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.1e-09 65.1 62 64.5
Thecc.01G412500 Theobroma cacao HOM05D005524 ORTHO05D005392 6.1e-09 63.5 60 61.7
CSS0022323 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 1.8e-08 62.0 60 60.0
CSS0030443 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 1.8e-08 62.0 59 57.6
CSS0036543 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 3.9e-08 60.8 60 56.7
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 5.1e-08 60.5 62 58.1
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 5.1e-08 60.5 62 58.1
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 5.1e-08 60.5 62 58.1
Hma1.2p1_0621F.1_g190610 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 5.1e-08 60.5 60 65.0
Potri.016G052001 Populus trichocarpa HOM05D005524 ORTHO05D005392 6.7e-08 60.1 62 61.3
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 1.1e-07 59.3 62 54.8
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 1.5e-07 58.9 62 54.8
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 54.8
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 54.8
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 54.8
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 54.8
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 54.8
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 54.8
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 2.0e-07 58.5 62 54.8
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 3.3e-07 57.8 62 53.2
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 4.4e-07 57.4 62 53.2
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 4.4e-07 57.4 62 53.2
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 4.4e-07 57.4 62 53.2
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 5.7e-07 57.0 62 53.2
Eucgr.H02490 Eucalyptus grandis HOM05D005524 ORTHO05D005392 7.4e-07 56.6 60 58.3
Eucgr.A02403 Eucalyptus grandis HOM05D005524 ORTHO05D005392 9.7e-07 56.2 62 59.7
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 1.3e-06 55.8 62 51.6
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 1.3e-06 55.8 62 51.6
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 1.3e-06 55.8 62 51.6
Dinv18091 Davidia involucrata HOM05D005524 ORTHO05D005392 1.3e-06 55.8 62 56.5
Aa31LG10G12450 Aethionema arabicum HOM05D005524 ORTHO05D005392 2.2e-06 55.1 61 52.5
TWI73G1008 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 2.2e-06 55.1 61 55.7
BcaC07g40149 Brassica carinata HOM05D005524 ORTHO05D005392 2.8e-06 54.7 62 53.2
Cc02_g27760 Coffea canephora HOM05D005524 ORTHO05D005392 3.7e-06 54.3 62 58.1
CiPaw.13G003600 Carya illinoinensis HOM05D005524 ORTHO05D005392 4.8e-06 53.9 65 58.5
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 4.8e-06 53.9 63 54.0
TWI09G0988 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 4.8e-06 53.9 61 55.7
Cc02_g27740 Coffea canephora HOM05D005524 ORTHO05D005392 8.2e-06 53.1 62 56.5
Potri.001G268800 Populus trichocarpa HOM05D005524 ORTHO05D005392 8.2e-06 53.1 61 54.1


User provided reference genes

Program Settings