Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022659 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 2.1e-41 171.8 80 100.0
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 3.1e-08 61.6 72 48.6
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 4.1e-08 61.2 72 47.2
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 4.1e-08 61.2 72 47.2
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 9.1e-08 60.1 71 47.9
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 9.1e-08 60.1 72 45.8
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 1.2e-07 59.7 71 45.1
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 1.6e-07 59.3 71 45.1
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 2.0e-07 58.9 72 45.8
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 2.0e-07 58.9 71 45.1
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 2.0e-07 58.9 71 45.1
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 2.0e-07 58.9 72 45.8
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 2.7e-07 58.5 72 45.8
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 3.5e-07 58.2 72 45.8
Haze_07832 Corylus avellana HOM05D003395 ORTHO05D004087 4.5e-07 57.8 72 44.4
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 4.5e-07 57.8 72 44.4
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 4.5e-07 57.8 72 44.4
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 4.5e-07 57.8 72 45.8
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 4.5e-07 57.8 74 40.5
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 5.9e-07 57.4 68 45.6
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 7.7e-07 57.0 72 44.4
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.7e-07 57.0 72 44.4
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.7e-07 57.0 72 44.4
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 7.7e-07 57.0 71 43.7
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 7.7e-07 57.0 74 40.5
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 7.7e-07 57.0 72 44.4
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 1.0e-06 56.6 72 41.7
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.0e-06 56.6 72 44.4
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 1.0e-06 56.6 69 44.9
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 1.3e-06 56.2 72 43.1
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 1.3e-06 56.2 69 44.9
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 1.3e-06 56.2 69 44.9
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 1.3e-06 56.2 72 43.1
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 1.7e-06 55.8 68 42.6
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 1.7e-06 55.8 74 39.2
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 2.2e-06 55.5 72 44.4
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 2.2e-06 55.5 72 44.4
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 2.2e-06 55.5 42 57.1
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 2.2e-06 55.5 72 44.4
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 2.2e-06 55.5 72 44.4
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 2.2e-06 55.5 69 44.9
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 2.2e-06 55.5 69 43.5
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 2.9e-06 55.1 27 77.8
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 2.9e-06 55.1 69 43.5
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 2.9e-06 55.1 74 39.2
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 2.9e-06 55.1 24 91.7
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 6.5e-06 53.9 24 87.5
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 6.5e-06 53.9 72 41.7
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 6.5e-06 53.9 24 87.5
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 6.5e-06 53.9 24 87.5


User provided reference genes

Program Settings