Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022653 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 2.8e-31 137.9 65 100.0
CSS0002379 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 5.8e-21 103.6 53 88.7
CSS0034072 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 8.4e-20 99.8 50 88.0
CSS0013113 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 2.5e-19 98.2 50 86.0
CSS0025411 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 2.1e-18 95.1 47 91.5
CSS0002439 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D000514 2.3e-17 91.7 55 81.8
GSVIVG01025280001 Vitis vinifera HOM05D000561 ORTHO05D000514 7.4e-16 86.7 47 83.0
Nn2g15468 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.3e-15 85.9 51 74.5
Rhsim13G0222000 Rhododendron simsii HOM05D000561 ORTHO05D000514 1.3e-15 85.9 50 78.0
HanXRQChr13g0405951 Helianthus annuus HOM05D000561 ORTHO05D000514 1.6e-15 85.5 50 76.0
TAR636G2461 Trochodendron aralioides HOM05D000561 ORTHO05D000514 1.6e-15 85.5 47 80.9
MBI01_g18892_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D000514 2.1e-15 85.1 47 80.9
Aa31LG11G5050 Aethionema arabicum HOM05D000561 ORTHO05D000514 3.1e-14 81.3 49 75.5
ATR0605G067 Amborella trichopoda HOM05D000561 ORTHO05D000514 3.1e-14 81.3 47 74.5
Glyma.13G340200 Glycine max HOM05D000561 ORTHO05D000514 3.1e-14 81.3 46 80.4
Prupe.5G028700 Prunus persica HOM05D000561 ORTHO05D000514 6.9e-14 80.1 49 75.5
Thecc.09G232000 Theobroma cacao HOM05D000561 ORTHO05D000514 9.0e-14 79.7 46 82.6
Aqoxy1G00237 Aquilegia oxysepala HOM05D000561 ORTHO05D000514 1.5e-13 79.0 45 75.6
ECA248G2811 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.5e-13 79.0 46 76.1
Glyma.12G057300 Glycine max HOM05D000561 ORTHO05D000514 2.0e-13 78.6 45 80.0
Gohir.A08G013600 Gossypium hirsutum HOM05D000561 ORTHO05D000514 2.0e-13 78.6 46 78.3
Gohir.D08G024100 Gossypium hirsutum HOM05D000561 ORTHO05D000514 2.0e-13 78.6 46 78.3
Gorai.004G019500 Gossypium raimondii HOM05D000561 ORTHO05D000514 2.0e-13 78.6 46 78.3
Hund07519 Selenicereus undatus HOM05D000561 ORTHO05D000514 2.0e-13 78.6 47 78.7
Duzib168G0910 Durio zibethinus HOM05D000561 ORTHO05D000514 2.6e-13 78.2 46 80.4
COL.COLO4_24888 Corchorus olitorius HOM05D000561 ORTHO05D000514 4.5e-13 77.4 46 78.3
Solyc11g065880.2 Solanum lycopersicum HOM05D000561 ORTHO05D000514 4.5e-13 77.4 45 80.0
Sopen11g025610 Solanum pennellii HOM05D000561 ORTHO05D000514 4.5e-13 77.4 45 80.0
Glyma.15G034200 Glycine max HOM05D000561 ORTHO05D000514 5.9e-13 77.0 46 76.1
TWI34G1960 Tripterygium wilfordii HOM05D000561 ORTHO05D000514 5.9e-13 77.0 47 76.6
Hma1.2p1_0606F.1_g188060 Hydrangea macrophylla HOM05D000561 ORTHO05D000514 7.6e-13 76.6 50 74.0
Cpa.g.sc84.66 Carica papaya HOM05D000561 ORTHO05D000514 1.0e-12 76.3 46 76.1
Thhalv10013617m.g Eutrema salsugineum HOM05D000561 ORTHO05D000514 1.0e-12 76.3 49 75.5
Glyma.11G133200 Glycine max HOM05D000561 ORTHO05D000514 1.0e-12 76.3 46 76.1
Gohir.A07G124500 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.0e-12 76.3 46 78.3
Gohir.D07G128800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.0e-12 76.3 46 78.3
Gorai.001G139100 Gossypium raimondii HOM05D000561 ORTHO05D000514 1.0e-12 76.3 46 78.3
MD11G1197600 Malus domestica HOM05D000561 ORTHO05D000514 1.0e-12 76.3 47 74.5
PGSC0003DMG400007361 Solanum tuberosum HOM05D000561 ORTHO05D000514 1.0e-12 76.3 45 77.8
CARHR193610 Cardamine hirsuta HOM05D000561 ORTHO05D000514 1.3e-12 75.9 49 73.5
AL6G30840 Arabidopsis lyrata HOM05D000561 ORTHO05D000514 2.2e-12 75.1 49 73.5
QL01p004975 Quercus lobata HOM05D000561 ORTHO05D000514 2.2e-12 75.1 47 74.5
Carub.0006s1769 Capsella rubella HOM05D000561 ORTHO05D000514 5.0e-12 73.9 49 73.5
C09p56930 Brassica napus HOM05D000561 ORTHO05D000514 6.5e-12 73.6 49 73.5
EL10Ac4g10266 Beta vulgaris HOM05D000561 ORTHO05D000514 8.4e-12 73.2 46 73.9
MD03G1176800 Malus domestica HOM05D000561 ORTHO05D000514 8.4e-12 73.2 48 75.0
CDE10G0196 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 1.1e-11 72.8 45 68.9
Ciclev10015576m.g Citrus clementina HOM05D000561 ORTHO05D000514 1.4e-11 72.4 46 73.9
THA.LOC104811163 Tarenaya hassleriana HOM05D000561 ORTHO05D000514 1.4e-11 72.4 46 73.9
Actinidia16326 Actinidia chinensis HOM05D000561 ORTHO05D000514 1.9e-11 72.0 47 76.6
EL10Ac4g10282 Beta vulgaris HOM05D000561 ORTHO05D000514 1.9e-11 72.0 46 71.7
A10p20330 Brassica napus HOM05D000561 ORTHO05D000514 1.9e-11 72.0 49 71.4
BolC9t58547H Brassica oleracea HOM05D000561 ORTHO05D000514 1.9e-11 72.0 49 69.4
BraA10t44104Z Brassica rapa HOM05D000561 ORTHO05D000514 1.9e-11 72.0 49 71.4
AT5G19350 Arabidopsis thaliana HOM05D000561 ORTHO05D000514 2.5e-11 71.6 49 69.4
Cc02_g33880 Coffea canephora HOM05D000561 ORTHO05D000514 2.5e-11 71.6 44 75.0
BcaB01g04865 Brassica carinata HOM05D000561 ORTHO05D000514 3.2e-11 71.2 49 71.4
BcaNung07025 Brassica carinata HOM05D000561 ORTHO05D000514 3.2e-11 71.2 49 71.4
MELO3C005531.2 Cucumis melo HOM05D000561 ORTHO05D000514 5.5e-11 70.5 47 70.2
BcaB01g05142 Brassica carinata HOM05D000561 ORTHO05D000514 7.2e-11 70.1 49 67.3
A03p09450 Brassica napus HOM05D000561 ORTHO05D000514 7.2e-11 70.1 49 67.3
C03p11030 Brassica napus HOM05D000561 ORTHO05D000514 7.2e-11 70.1 49 67.3
BolC3t13572H Brassica oleracea HOM05D000561 ORTHO05D000514 7.2e-11 70.1 49 67.3
BraA03t10263Z Brassica rapa HOM05D000561 ORTHO05D000514 7.2e-11 70.1 49 67.3
PSO384G1656 Papaver somniferum HOM05D000561 ORTHO05D000514 7.2e-11 70.1 47 63.8
Phvul.L009343 Phaseolus vulgaris HOM05D000561 ORTHO05D000514 7.2e-11 70.1 47 70.2
Sp6g25060 Schrenkiella parvula HOM05D000561 ORTHO05D000514 7.2e-11 70.1 49 73.5
PSO339G4568 Papaver somniferum HOM05D000561 ORTHO05D000514 9.3e-11 69.7 47 63.8
CsaV3_5G004230 Cucumis sativus L. HOM05D000561 ORTHO05D000514 1.6e-10 68.9 47 68.1
Actinidia06901 Actinidia chinensis HOM05D000561 ORTHO05D000514 2.1e-10 68.6 47 74.5
Lj3g0003681 Lotus japonicus HOM05D000561 ORTHO05D000514 2.1e-10 68.6 44 70.5
Oeu001477.2 Olea europaea HOM05D000003 ORTHO05D000514 2.1e-10 68.6 51 68.6
Potri.009G054400 Populus trichocarpa HOM05D000561 ORTHO05D000514 2.1e-10 68.6 41 78.0
Sabra09G0039700 Salix brachista HOM05D000561 ORTHO05D000514 2.1e-10 68.6 41 78.0
Lj3g0012879 Lotus japonicus HOM05D000561 ORTHO05D000514 4.6e-10 67.4 47 74.5
VMungo1127G1920 Vigna mungo HOM05D000561 ORTHO05D000514 6.1e-10 67.0 47 70.2
Manes.14G001900 Manihot esculenta HOM05D000561 ORTHO05D000514 7.9e-10 66.6 40 77.5
Cfa009761 Carpinus fangiana HOM05D000561 ORTHO05D000514 1.0e-09 66.2 47 68.1
Migut.D00595 Erythranthe guttata HOM05D000561 ORTHO05D000514 1.0e-09 66.2 47 68.1
Lsat_1_v5_gn_1_66300 Lactuca sativa HOM05D000561 ORTHO05D000514 1.3e-09 65.9 43 72.1
Nn1g03553 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.3e-09 65.9 48 60.4
Eucgr.J00778 Eucalyptus grandis HOM05D000561 ORTHO05D000514 2.3e-09 65.1 40 72.5
Nn004s41401 Nelumbo nucifera HOM05D000561 ORTHO05D000514 2.3e-09 65.1 47 61.7
SalBow2G0499 Salvia bowleyana HOM05D000561 ORTHO05D000514 3.0e-09 64.7 44 70.5
Mapoly0013s0011 Marchantia polymorpha HOM05D000561 ORTHO05D000514 3.9e-09 64.3 47 61.7
PGR119G1727 Punica granatum HOM05D000561 ORTHO05D000514 1.1e-08 62.8 47 63.8
DCAR_029947 Daucus carota HOM05D000561 ORTHO05D000514 1.9e-08 62.0 46 60.9
Lalb_Chr01g0003351 Lupinus albus HOM05D000561 ORTHO05D000514 1.9e-08 62.0 46 69.6
HPP92_005831 Vanilla planifolia HOM05D000561 ORTHO05D000514 1.9e-08 62.0 48 58.3
HPP92_005856 Vanilla planifolia HOM05D000561 ORTHO05D000514 1.9e-08 62.0 48 58.3
HPP92_005912 Vanilla planifolia HOM05D000561 ORTHO05D000514 1.9e-08 62.0 48 58.3
Zm00001eb005630 Zea mays HOM05D000561 ORTHO05D000514 1.9e-08 62.0 50 64.0
arahy.Tifrunner.gnm1.ann1.Z4F097 Arachis hypogaea HOM05D000561 ORTHO05D000514 2.5e-08 61.6 47 63.8
SEGI_02787 Sequoiadendron giganteum HOM05D000561 ORTHO05D000514 3.3e-08 61.2 48 58.3
VMungo1080G0863 Vigna mungo HOM05D000561 ORTHO05D000514 3.3e-08 61.2 47 61.7
CiPaw.14G119600 Carya illinoinensis HOM05D000561 ORTHO05D000514 7.4e-08 60.1 34 79.4
MBI02_g22113_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D000514 7.4e-08 60.1 59 50.8
arahy.Tifrunner.gnm1.ann1.GE7Z65 Arachis hypogaea HOM05D000561 ORTHO05D000514 1.3e-07 59.3 37 73.0
AUR62000109 Chenopodium quinoa HOM05D000561 ORTHO05D000514 1.6e-07 58.9 38 71.1
AUR62019286 Chenopodium quinoa HOM05D000561 ORTHO05D000514 1.6e-07 58.9 38 71.1
Manes.03G128501 Manihot esculenta HOM05D000561 ORTHO05D000514 1.6e-07 58.9 45 57.8
ATR0752G101 Amborella trichopoda HOM05D000561 ORTHO05D000514 2.2e-07 58.5 49 55.1
Sc16g0011530 Simmondsia chinensis HOM05D000561 ORTHO05D000514 2.2e-07 58.5 47 55.3
SEGI_29644 Sequoiadendron giganteum HOM05D000561 ORTHO05D000514 2.8e-07 58.2 44 59.1
MSTRG.21383 Avicennia marina HOM05D000561 ORTHO05D000514 3.7e-07 57.8 50 60.0
Manes.15G072700 Manihot esculenta HOM05D000561 ORTHO05D000514 3.7e-07 57.8 48 58.3
Os03g0174100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D000514 4.8e-07 57.4 50 60.0
Sed0011306 Sechium edule HOM05D000561 ORTHO05D000514 8.2e-07 56.6 39 71.8
CANSAT54G1581 Cannabis sativa HOM05D000561 ORTHO05D000514 1.1e-06 56.2 48 60.4
ClCG01G004050 Citrullus lanatus HOM05D000561 ORTHO05D000514 1.1e-06 56.2 38 68.4
HPP92_006294 Vanilla planifolia HOM05D000561 ORTHO05D000514 1.1e-06 56.2 48 54.2
HPP92_006315 Vanilla planifolia HOM05D000561 ORTHO05D000514 1.1e-06 56.2 48 54.2
CDE02G4501 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 1.8e-06 55.5 50 52.0
CDE05G3198 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 1.8e-06 55.5 48 52.1
HPP92_024152 Vanilla planifolia HOM05D000561 ORTHO05D000514 1.8e-06 55.5 53 52.8
HPP92_024194 Vanilla planifolia HOM05D000561 ORTHO05D000514 2.4e-06 55.1 53 52.8
CDE06G2223 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 4.1e-06 54.3 39 59.0
SalBow8G1719 Salvia bowleyana HOM05D000561 ORTHO05D000514 5.3e-06 53.9 47 57.4
HPP92_016294 Vanilla planifolia HOM05D000561 ORTHO05D000514 6.9e-06 53.5 49 51.0
Ca_01295_v3 Cicer arietinum L. HOM05D000561 ORTHO05D000514 9.0e-06 53.1 34 70.6
Os08g0190200 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D000514 9.0e-06 53.1 48 50.0
Zm00001eb171480 Zea mays HOM05D000561 ORTHO05D000514 9.0e-06 53.1 51 51.0


User provided reference genes

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