Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 4.7e-149 531.2 270 100.0
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 6.2e-117 424.5 264 80.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.1e-116 422.2 264 81.4
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.5e-115 419.9 243 85.6
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 2.7e-112 409.1 252 79.0
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 7.8e-112 407.5 253 78.3
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 1.1e-110 403.7 241 82.2
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.5e-110 402.5 264 76.1
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 7.3e-110 401.0 248 77.0
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 2.8e-109 399.1 240 80.4
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 3.6e-109 398.7 240 79.2
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.6e-109 398.7 240 79.2
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 6.2e-109 397.9 265 75.5
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.1e-108 397.1 252 79.0
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 1.5e-107 393.3 246 77.6
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.5e-107 391.7 240 77.9
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 3.8e-106 388.7 236 80.9
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.9e-106 388.3 240 79.6
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 4.9e-106 388.3 237 79.3
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 3.2e-105 385.6 248 76.6
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 7.1e-105 384.4 246 75.6
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 7.1e-105 384.4 237 81.0
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.2e-104 383.6 246 75.2
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.6e-104 383.3 248 74.2
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 2.1e-104 382.9 248 73.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 2.7e-104 382.5 242 78.5
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 2.7e-104 382.5 248 74.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 3.5e-104 382.1 259 73.7
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 6.0e-104 381.3 242 78.1
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 6.0e-104 381.3 269 74.7
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.3e-103 379.4 242 78.1
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 1.1e-102 377.1 241 75.1
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.5e-102 376.7 241 77.6
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 2.5e-102 375.9 263 70.7
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.3e-101 373.6 238 75.2
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.3e-101 373.6 265 71.3
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.6e-101 373.2 246 72.8
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.6e-101 373.2 246 72.8
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 2.1e-101 372.9 234 76.5
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 6.2e-101 371.3 248 72.6
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 8.1e-101 370.9 238 76.1
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 8.1e-101 370.9 248 72.6
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.1e-100 370.5 234 76.1
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.1e-100 370.5 234 76.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.4e-100 370.2 234 76.1
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.8e-100 369.8 234 76.1
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 2.4e-100 369.4 234 76.1
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 3.1e-100 369.0 234 76.1
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.1e-100 369.0 272 69.5
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 5.3e-100 368.2 234 75.2
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.2e-99 367.1 238 76.9
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.5e-99 366.7 247 71.3
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.6e-99 365.9 234 74.8
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.4e-99 365.5 236 76.7
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.0e-98 364.0 247 70.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 6.5e-98 361.3 256 71.1
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 6.5e-98 361.3 248 71.4
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.1e-97 360.5 245 72.7
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 2.5e-97 359.4 269 66.5
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.6e-96 356.7 250 70.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.1e-96 356.3 250 69.6
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 2.7e-96 355.9 237 71.7
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.7e-96 355.9 260 68.5
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 4.6e-96 355.1 263 68.1
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 7.9e-96 354.4 273 66.7
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.3e-95 353.6 234 72.2
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 2.3e-95 352.8 234 71.8
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 8.7e-95 350.9 250 68.8
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.5e-94 350.1 250 70.0
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.3e-94 349.0 250 70.0
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 4.8e-93 345.1 236 69.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 4.8e-93 345.1 246 69.1
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.4e-92 343.6 241 71.4
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 2.4e-92 342.8 238 68.5
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 6.9e-92 341.3 238 68.1
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.5e-91 340.1 250 67.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.0e-91 339.7 234 70.1
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 9.3e-89 330.9 213 75.6
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 9.3e-89 330.9 238 66.4
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 1.6e-88 330.1 203 82.8
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 7.9e-88 327.8 262 63.0
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 3.9e-87 325.5 213 75.1
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 6.7e-87 324.7 234 67.9
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.1e-86 323.9 256 68.8
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.5e-86 322.8 213 75.6
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.5e-86 322.8 228 70.2
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 3.1e-84 315.8 223 68.6
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.5e-83 313.5 197 77.7
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.5e-83 313.5 246 64.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 9.7e-78 294.3 234 59.0
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.4e-76 290.4 237 59.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 2.9e-74 282.7 238 61.8
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 6.7e-71 271.6 214 59.8
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.8e-68 263.5 236 55.1
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 7.0e-68 261.5 234 55.1
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 8.5e-66 254.6 244 53.3
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 4.7e-64 248.8 267 50.9
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 2.3e-63 246.5 235 49.8
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.3e-62 242.7 238 48.3
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.3e-62 242.7 238 48.3
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.4e-62 241.5 234 49.6
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.1e-60 237.7 213 54.0
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-60 236.9 234 50.0
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-60 235.7 234 49.6
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.1e-60 235.7 234 50.4
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-59 233.8 234 49.6
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.6e-59 233.0 234 50.0
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 3.8e-42 176.0 103 75.7
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.5e-33 147.5 127 58.3
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.2e-32 144.4 235 40.0
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.0e-31 141.4 119 58.8
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 2.1e-11 73.9 39 87.2


User provided reference genes

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