Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.6e-65 251.1 133 100.0
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.0e-59 231.1 133 92.5
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.5e-59 230.7 133 91.7
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.3e-55 218.4 135 88.1
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.3e-54 214.2 134 87.3
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.0e-52 209.1 135 86.7
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.5e-51 203.8 135 85.2
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-50 203.0 135 84.4
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.3e-48 195.7 131 84.0
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.7e-47 191.0 133 80.5
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.2e-12 77.0 92 50.0
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 4.5e-12 75.1 98 39.8
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.7e-11 73.2 106 44.3
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 3.9e-11 72.0 107 43.0
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 1.5e-10 70.1 106 37.7
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.6e-10 68.2 76 46.1
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 7.3e-10 67.8 104 41.3
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 1.2e-09 67.0 108 40.7
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.2e-09 67.0 77 45.5
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.0e-08 63.9 118 34.7
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.0e-08 63.9 128 35.2
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 1.4e-08 63.5 96 41.7
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 3.1e-08 62.4 118 34.7
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 4.0e-08 62.0 109 31.2
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.0e-08 62.0 80 41.2
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 5.2e-08 61.6 80 41.2
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.8e-08 61.2 83 39.8
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 8.9e-08 60.8 86 37.2
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.5e-07 60.1 97 37.1
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 1.5e-07 60.1 117 39.3
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 2.0e-07 59.7 118 39.8
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 2.0e-07 59.7 90 37.8
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 2.6e-07 59.3 91 38.5
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.4e-07 58.5 90 38.9
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 5.8e-07 58.2 87 37.9
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 7.5e-07 57.8 82 40.2
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 9.8e-07 57.4 97 42.3
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 9.8e-07 57.4 87 36.8
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 9.8e-07 57.4 95 35.8
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.8e-07 57.4 72 43.1
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.7e-06 56.6 106 35.8
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 2.2e-06 56.2 82 37.8
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 2.9e-06 55.8 96 36.5
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.7e-06 55.5 112 38.4
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 4.9e-06 55.1 105 35.2
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.9e-06 55.1 125 32.0
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.9e-06 55.1 125 32.0
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 6.4e-06 54.7 98 31.6
Duzib151G0273 Durio zibethinus HOM05D008138 ORTHO05D010043 8.3e-06 54.3 85 42.4
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 8.3e-06 54.3 102 35.3


User provided reference genes

Program Settings