Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022597 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D006660 4.1e-145 518.5 351 100.0
Dinv05157 Davidia involucrata HOM05D000520 ORTHO05D006660 2.0e-46 190.7 347 52.4
Rhsim09G0067300 Rhododendron simsii HOM05D000520 ORTHO05D006660 4.4e-46 189.5 326 46.6
QL01p002036 Quercus lobata HOM05D000520 ORTHO05D006660 1.7e-45 187.6 344 49.7
Cpa.g.sc211.1 Carica papaya HOM05D000520 ORTHO05D006660 1.1e-44 184.9 344 48.8
Haze_11022 Corylus avellana HOM05D000520 ORTHO05D006660 4.5e-43 179.5 354 49.4
Cfa008592 Carpinus fangiana HOM05D000520 ORTHO05D006660 5.9e-43 179.1 344 51.2
Duzib251G0101 Durio zibethinus HOM05D000520 ORTHO05D006660 5.0e-42 176.0 344 50.6
Actinidia15253 Actinidia chinensis HOM05D000520 ORTHO05D006660 1.5e-41 174.5 341 47.5
Actinidia36680 Actinidia chinensis HOM05D000520 ORTHO05D006660 2.5e-41 173.7 341 46.6
Medtr1g107565 Medicago truncatula HOM05D000520 ORTHO05D006660 4.2e-41 172.9 331 48.3
Cc11_g08860 Coffea canephora HOM05D000520 ORTHO05D006660 5.5e-41 172.6 349 46.4
CiPaw.05G248300 Carya illinoinensis HOM05D000520 ORTHO05D006660 9.4e-41 171.8 331 49.2
vmacro00420 Vaccinium macrocarpon HOM05D000520 ORTHO05D006660 1.6e-40 171.0 235 53.2
Actinidia14956 Actinidia chinensis HOM05D000520 ORTHO05D006660 4.7e-40 169.5 338 46.2
Ciclev10015481m.g Citrus clementina HOM05D000520 ORTHO05D006660 1.0e-39 168.3 363 47.1
Duzib268G0327 Durio zibethinus HOM05D000520 ORTHO05D006660 4.0e-39 166.4 343 49.3
TPR.G13856 Trifolium pratense HOM05D000520 ORTHO05D006660 7.5e-38 162.2 344 47.4
arahy.Tifrunner.gnm1.ann1.Y3J10V Arachis hypogaea HOM05D000520 ORTHO05D006660 1.7e-37 161.0 350 47.7
Nitab4.5_0004776g0010 Nicotiana tabacum HOM05D000520 ORTHO05D006660 2.2e-37 160.6 351 50.4
MSTRG.13576 Avicennia marina HOM05D000520 ORTHO05D006660 2.8e-37 160.2 346 43.9
Lalb_Chr06g0165561 Lupinus albus HOM05D000520 ORTHO05D006660 2.8e-37 160.2 347 47.0
Potri.008G128400 Populus trichocarpa HOM05D000520 ORTHO05D006660 6.3e-37 159.1 344 43.6
Oeu045880.1 Olea europaea HOM05D000520 ORTHO05D006660 1.4e-36 157.9 328 46.3
Prupe.1G323100 Prunus persica HOM05D000520 ORTHO05D006660 3.1e-36 156.8 339 45.4
RcHm_v2.0_Chr4g0441051 Rosa chinensis HOM05D000520 ORTHO05D006660 7.0e-36 155.6 348 44.3
FAN07G1117 Fragaria x ananassa HOM05D000520 ORTHO05D006660 1.2e-35 154.8 355 40.8
Thecc.02G279600 Theobroma cacao HOM05D000520 ORTHO05D006660 1.6e-35 154.5 338 45.3
arahy.Tifrunner.gnm1.ann1.BFI5I2 Arachis hypogaea HOM05D000520 ORTHO05D006660 2.0e-35 154.1 350 47.1
Peaxi162Scf00205g00218 Petunia axillaris HOM05D000520 ORTHO05D006660 3.5e-35 153.3 346 48.0
FvH4_4g32260 Fragaria vesca HOM05D000520 ORTHO05D006660 2.9e-34 150.2 347 40.1
FAN12G2402 Fragaria x ananassa HOM05D000520 ORTHO05D006660 5.0e-34 149.4 358 39.7
Duzib248G0732 Durio zibethinus HOM05D000520 ORTHO05D006660 1.9e-33 147.5 344 43.0
Lj3A874T75 Lonicera japonica HOM05D000520 ORTHO05D006660 1.9e-33 147.5 327 44.0
FAN17G1289 Fragaria x ananassa HOM05D000520 ORTHO05D006660 1.2e-32 144.8 364 41.5
VMungo0720G2306 Vigna mungo HOM05D000520 ORTHO05D006660 2.1e-32 144.1 347 44.7
Phvul.007G038000 Phaseolus vulgaris HOM05D000520 ORTHO05D006660 1.8e-31 141.0 351 41.0
Manes.15G126600 Manihot esculenta HOM05D000520 ORTHO05D006660 2.3e-31 140.6 339 46.0
FAN22G1850 Fragaria x ananassa HOM05D000520 ORTHO05D006660 4.0e-31 139.8 356 41.3
MSTRG.2183 Avicennia marina HOM05D000520 ORTHO05D006660 5.2e-31 139.4 346 41.0
TWI31G0048 Tripterygium wilfordii HOM05D000520 ORTHO05D006660 1.2e-30 138.3 344 39.5
Dinv12999 Davidia involucrata HOM05D000520 ORTHO05D006660 1.3e-29 134.8 339 52.8
Nn4g24109 Nelumbo nucifera HOM05D000520 ORTHO05D006660 2.2e-29 134.0 333 40.2
DCAR_030213 Daucus carota HOM05D000520 ORTHO05D006660 2.8e-29 133.7 326 36.5
Glyma.10G264000 Glycine max HOM05D000520 ORTHO05D006660 6.3e-29 132.5 351 42.7
Hma1.2p1_0464F.1_g158310 Hydrangea macrophylla HOM05D000520 ORTHO05D006660 8.3e-29 132.1 332 47.0
CiPaw.06G012700 Carya illinoinensis HOM05D000520 ORTHO05D006660 1.1e-28 131.7 335 40.6
Lj5g0008903 Lotus japonicus HOM05D000520 ORTHO05D006660 1.1e-28 131.7 342 50.0
Manes.17G075400 Manihot esculenta HOM05D000520 ORTHO05D006660 2.4e-28 130.6 361 46.8
Peaxi162Scf00253g00161 Petunia axillaris HOM05D000520 ORTHO05D006660 2.0e-27 127.5 332 41.0
CSS0002618 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D006660 3.5e-27 126.7 347 42.1
Glyma.20G126300 Glycine max HOM05D000520 ORTHO05D006660 5.9e-27 125.9 360 41.1
MD16G1029800 Malus domestica HOM05D000520 ORTHO05D006660 7.7e-27 125.6 339 46.6
Actinidia31979 Actinidia chinensis HOM05D000520 ORTHO05D006660 2.9e-26 123.6 318 41.5
Potri.010G114300 Populus trichocarpa HOM05D000520 ORTHO05D006660 1.1e-25 121.7 365 42.2
Sabra08G0096900 Salix brachista HOM05D000520 ORTHO05D006660 1.2e-22 111.7 343 38.2
Sed0000495 Sechium edule HOM05D000520 ORTHO05D006660 2.6e-22 110.5 262 39.3
Sc04g0005670 Simmondsia chinensis HOM05D000520 ORTHO05D006660 3.4e-22 110.2 243 40.3
Nn3g18194 Nelumbo nucifera HOM05D000520 ORTHO05D006660 1.7e-21 107.8 285 38.6
unitig_52.g17124 Utricularia gibba HOM05D000520 ORTHO05D006660 3.7e-21 106.7 235 38.3
Sabra10G0084300 Salix brachista HOM05D000520 ORTHO05D006660 4.1e-20 103.2 341 37.0
COL.COLO4_20462 Corchorus olitorius HOM05D000520 ORTHO05D006660 1.0e-18 98.6 188 48.4
Nitab4.5_0007425g0040 Nicotiana tabacum HOM05D000520 ORTHO05D006660 1.3e-18 98.2 325 36.6
CsaV3_5G028550 Cucumis sativus L. HOM05D000520 ORTHO05D006660 3.9e-18 96.7 250 40.4
MELO3C005316.2 Cucumis melo HOM05D000520 ORTHO05D006660 1.5e-17 94.7 249 39.4
Hund20684 Selenicereus undatus HOM05D000520 ORTHO05D006660 4.3e-17 93.2 248 37.9
ClCG01G006110 Citrullus lanatus HOM05D000520 ORTHO05D006660 1.2e-16 91.7 253 38.3
Lalb_Chr21g0308471 Lupinus albus HOM05D000520 ORTHO05D006660 1.2e-16 91.7 195 39.5
Migut.A00133 Erythranthe guttata HOM05D000520 ORTHO05D006660 3.6e-16 90.1 329 37.4
unitig_62.g23731 Utricularia gibba HOM05D000520 ORTHO05D006660 4.0e-15 86.7 209 37.3
Psat6g220320 Pisum sativum HOM05D000520 ORTHO05D006660 5.8e-14 82.8 334 42.2
DCAR_007286 Daucus carota HOM05D000520 ORTHO05D006660 8.3e-13 79.0 248 36.3
HanXRQChr10g0317181 Helianthus annuus HOM05D000520 ORTHO05D006660 7.8e-11 72.4 341 40.8
PGR102G0828 Punica granatum HOM05D000520 ORTHO05D006660 1.7e-10 71.2 134 44.8
ECA233G1921 Erigeron canadensis HOM05D000520 ORTHO05D006660 6.6e-10 69.3 153 42.5
MBI16_g46275_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D006660 2.5e-09 67.4 331 38.7
PGSC0003DMG400030552 Solanum tuberosum HOM05D000520 ORTHO05D006660 2.8e-08 63.9 352 39.2
SGA_v2.0_scaffold39G15159 Striga asiatica HOM05D000520 ORTHO05D006660 8.1e-08 62.4 143 42.0
HanXRQChr08g0212661 Helianthus annuus HOM05D000520 ORTHO05D006660 3.1e-07 60.5 69 53.6
Sp1g20460 Schrenkiella parvula HOM05D000520 ORTHO05D006660 2.0e-06 57.8 233 33.9
HanXRQChr12g0377611 Helianthus annuus HOM05D000520 ORTHO05D006660 2.6e-06 57.4 109 43.1
Lsat_1_v5_gn_8_43280 Lactuca sativa HOM05D000520 ORTHO05D006660 2.6e-06 57.4 67 53.7
Thhalv10009651m.g Eutrema salsugineum HOM05D000520 ORTHO05D006660 4.4e-06 56.6 256 32.4
SalBow8G1681 Salvia bowleyana HOM05D000520 ORTHO05D006660 7.5e-06 55.8 225 29.3
Sed0008603 Sechium edule HOM05D000520 ORTHO05D006660 7.5e-06 55.8 245 39.2
BcaB07g32298 Brassica carinata HOM05D000520 ORTHO05D006660 9.8e-06 55.5 250 32.4


User provided reference genes

Program Settings