Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 3.2e-253 877.9 425 100.0
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 1.2e-218 763.1 425 83.5
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 4.4e-218 761.1 425 83.1
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.7e-218 760.8 425 82.8
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 6.4e-217 757.3 425 84.0
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.2e-210 736.5 415 82.9
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 1.3e-209 733.0 425 80.0
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.9e-209 731.9 425 79.8
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 6.4e-209 730.7 413 81.1
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.9e-208 729.2 425 80.0
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 2.4e-208 728.8 425 79.5
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.2e-207 726.5 425 78.6
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.6e-207 726.1 425 79.3
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 6.0e-207 724.2 425 78.6
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.0e-206 723.4 425 79.3
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.3e-206 723.0 408 81.9
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 5.0e-206 721.1 427 78.0
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 6.6e-206 720.7 410 81.2
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 6.6e-206 720.7 425 77.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.6e-206 720.3 425 77.2
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.1e-205 719.9 424 79.2
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 2.5e-205 718.8 425 75.8
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 3.3e-205 718.4 425 76.7
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.6e-204 716.1 425 80.0
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 3.6e-204 714.9 425 76.7
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 1.5e-202 709.5 425 75.1
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 1.5e-202 709.5 425 74.8
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 2.0e-202 709.1 414 78.5
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 3.4e-202 708.4 427 75.2
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 9.9e-202 706.8 425 79.1
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 3.7e-201 704.9 450 73.3
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 3.7e-201 704.9 425 76.5
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 8.3e-201 703.7 425 76.7
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.4e-200 703.0 413 80.1
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.4e-200 703.0 422 76.5
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 4.1e-200 701.4 425 75.5
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 5.4e-200 701.0 425 75.1
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 7.1e-200 700.7 393 82.2
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 2.1e-199 699.1 420 76.2
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 6.0e-199 697.6 425 74.6
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.3e-198 696.4 425 74.4
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 2.3e-198 695.7 413 78.0
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 8.6e-198 693.7 425 74.6
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.6e-196 689.5 425 74.1
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 4.7e-196 688.0 425 73.6
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 6.2e-196 687.6 425 73.4
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 8.1e-196 687.2 420 73.3
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 8.1e-196 687.2 425 73.4
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 8.1e-196 687.2 420 75.2
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 8.1e-196 687.2 426 74.2
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.1e-195 686.8 425 73.9
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 3.1e-195 685.3 425 73.2
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 6.8e-195 684.1 420 73.3
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 6.8e-195 684.1 425 73.2
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 6.8e-195 684.1 425 73.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 8.9e-195 683.7 425 75.5
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.2e-194 683.3 425 75.1
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.0e-194 682.6 407 75.9
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.4e-194 681.4 411 76.9
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 7.6e-194 680.6 425 72.7
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 2.9e-193 678.7 425 73.6
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 8.4e-193 677.2 426 72.8
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 2.4e-192 675.6 420 73.6
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 2.4e-192 675.6 423 74.9
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 3.2e-192 675.2 426 73.7
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.6e-191 671.4 422 74.2
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 6.0e-191 671.0 426 72.5
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 7.8e-191 670.6 414 74.6
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 5.1e-190 667.9 402 75.1
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.6e-188 662.9 409 74.3
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.1e-187 660.2 425 70.8
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.2e-186 656.8 420 72.6
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 2.6e-186 655.6 541 61.6
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 7.6e-186 654.1 425 71.1
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.3e-185 653.3 426 72.1
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 2.9e-185 652.1 425 71.3
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 6.4e-185 651.0 426 71.4
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 2.4e-184 649.0 409 72.4
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.3e-182 642.5 458 69.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.6e-180 635.2 411 73.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 4.0e-179 631.7 436 67.7
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 4.9e-177 624.8 423 70.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 4.2e-176 621.7 470 63.6
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 3.9e-174 615.1 414 70.0
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.8e-171 606.3 415 71.1
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 3.9e-166 588.6 423 63.8
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 6.7e-158 561.2 386 67.1
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 2.4e-155 552.7 371 70.6
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 9.0e-155 550.8 415 63.9
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.1e-152 543.9 364 70.3
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.9e-152 543.1 314 78.0
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 2.3e-150 536.2 314 77.4
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 3.4e-146 522.3 387 68.2
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 2.6e-141 506.1 425 61.2
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 7.3e-104 381.7 214 83.2
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 6.6e-97 358.6 346 46.0
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.0e-94 349.4 206 77.7
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-92 344.0 204 75.0
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 4.4e-85 319.3 376 41.2
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 4.6e-82 309.3 346 42.8
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 6.6e-73 278.9 352 36.6
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 9.9e-61 238.4 279 40.1
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.8e-47 193.7 106 82.1
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.3e-41 174.9 105 75.2
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.3e-39 168.3 116 69.0
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.3e-39 168.3 116 69.0
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 6.3e-39 166.0 105 72.4
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 2.2e-36 157.5 85 82.4
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 4.3e-32 143.3 139 56.1
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.5e-13 80.5 49 71.4
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.7e-12 78.2 50 68.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.2e-12 77.8 49 69.4
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.6e-10 71.6 45 71.1
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.8e-09 68.2 48 62.5
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.3e-07 62.0 62 50.0


User provided reference genes

Program Settings