Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022526 Camellia sinensis var. sinensis HOM05D041851 ORTHO05D033901 3.8e-31 137.5 68 100.0
CSS0002499 Camellia sinensis var. sinensis HOM05D041851 ORTHO05D033901 2.7e-29 131.3 68 95.6
CSS0004285 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-23 112.8 67 79.1
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-23 112.8 67 79.1
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-23 112.8 67 79.1
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-23 112.8 67 79.1
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 4.2e-22 107.5 67 76.1
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 4.2e-22 107.5 67 76.1
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 3.6e-21 104.4 67 74.6
CSS0021957 Camellia sinensis var. sinensis HOM05D041851 ORTHO05D033901 3.7e-18 94.4 68 67.6
AUR62005892 Chenopodium quinoa HOM05D000004 ORTHO05D000378 2.7e-08 61.6 69 47.8
Lj4C714G8 Lonicera japonica HOM05D000691 ORTHO05D000378 4.5e-08 60.8 63 46.0
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 2.3e-07 58.5 64 43.8
AUR62039030 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.3e-07 58.5 55 54.5
AUR62042282 Chenopodium quinoa HOM05D000004 ORTHO05D000378 3.8e-07 57.8 66 48.5
EL10Ac9g20847 Beta vulgaris HOM05D000691 ORTHO05D000378 1.1e-06 56.2 61 49.2
Lj4C260T12 Lonicera japonica HOM05D000691 ORTHO05D000378 1.1e-06 56.2 62 45.2
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 1.1e-06 56.2 67 38.8
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-06 55.5 67 38.8
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-06 55.5 67 38.8
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-06 55.5 67 38.8
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-06 55.5 67 38.8
SHI14681 Sapria himalayana HOM05D000691 ORTHO05D000378 1.9e-06 55.5 59 47.5
Gorai.001G162200 Gossypium raimondii HOM05D035971 ORTHO05D000378 3.3e-06 54.7 67 37.3
AUR62029168 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.2e-06 53.5 66 45.5


User provided reference genes

Program Settings