Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022523 Camellia sinensis var. sinensis HOM05D014353 ORTHO05D002944 4.9e-179 630.9 305 100.0
CSS0039922 Camellia sinensis var. sinensis HOM05D014353 ORTHO05D002944 8.8e-144 513.8 270 94.1
CSS0011548 Camellia sinensis var. sinensis HOM05D014353 ORTHO05D002944 6.1e-137 491.1 271 91.1
Actinidia16803 Actinidia chinensis HOM05D014353 ORTHO05D002944 9.3e-61 238.0 285 49.1
Dinv40663 Davidia involucrata HOM05D014353 ORTHO05D002944 2.2e-54 216.9 312 43.9
Dinv04617 Davidia involucrata HOM05D000845 ORTHO05D003813 1.7e-46 190.7 262 43.1
Rhsim13G0191200 Rhododendron simsii HOM05D014353 ORTHO05D002944 1.8e-43 180.6 286 41.3
Actinidia35571 Actinidia chinensis HOM05D014353 ORTHO05D002944 2.5e-37 160.2 167 53.9
CSS0028772 Camellia sinensis var. sinensis HOM05D014353 ORTHO05D002944 8.5e-30 135.2 148 52.7
TAR624G1329 Trochodendron aralioides HOM05D004563 ORTHO05D002944 1.8e-19 100.9 183 33.3
CAN.G370.64 Capsicum annuum HOM05D014572 ORTHO05D016880 2.5e-13 80.5 223 29.1
Duzib235G1377 Durio zibethinus HOM05D004563 ORTHO05D002944 2.5e-13 80.5 119 37.0
Ciclev10008068m.g Citrus clementina HOM05D008023 ORTHO05D002944 4.7e-12 76.3 197 29.4
TAR629G2655 Trochodendron aralioides HOM05D004563 ORTHO05D002944 1.8e-11 74.3 215 27.9
Sabra04G0036000 Salix brachista HOM05D023908 ORTHO05D002944 3.0e-11 73.6 244 27.5
Thecc.06G172300 Theobroma cacao HOM05D004563 ORTHO05D002944 3.0e-11 73.6 129 34.9
TAR626G0367 Trochodendron aralioides HOM05D004563 ORTHO05D002944 3.0e-11 73.6 85 42.4
Potri.011G065100 Populus trichocarpa HOM05D023908 ORTHO05D002944 5.2e-11 72.8 168 31.0
TWI63G0650 Tripterygium wilfordii HOM05D032972 ORTHO05D037803 2.0e-10 70.9 167 32.3
Potri.004G055300 Populus trichocarpa HOM05D023908 ORTHO05D002944 2.6e-10 70.5 244 26.6
Medtr4g079720 Medicago truncatula HOM05D004563 ORTHO05D002944 3.4e-10 70.1 194 28.4
TWI38G0720 Tripterygium wilfordii HOM05D032972 ORTHO05D037803 3.4e-10 70.1 178 29.8
Duzib192G1010 Durio zibethinus HOM05D004563 ORTHO05D017903 5.7e-10 69.3 160 33.8
CAN.G318.9 Capsicum annuum HOM05D004563 ORTHO05D002944 1.3e-09 68.2 280 26.8
Gorai.010G159000 Gossypium raimondii HOM05D004563 ORTHO05D002944 1.7e-09 67.8 89 40.4
Duzib213G0674 Durio zibethinus HOM05D008023 ORTHO05D002944 2.2e-09 67.4 227 24.2
Gohir.D06G136800 Gossypium hirsutum HOM05D004563 ORTHO05D002944 6.3e-09 65.9 89 39.3
CSS0022203 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 1.4e-08 64.7 135 31.1
Atru.chr6.2814 Acer truncatum HOM05D004563 ORTHO05D002944 1.8e-08 64.3 210 24.8
CSS0035750 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.4e-08 63.9 87 36.8
CSS0038794 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.4e-08 63.9 161 28.6
CSS0041377 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.4e-08 63.9 87 36.8
Aqoxy1G03185 Aquilegia oxysepala HOM05D004563 ORTHO05D002944 5.4e-08 62.8 93 32.3
VMungo1080G1187 Vigna mungo HOM05D002364 ORTHO05D002540 5.4e-08 62.8 252 25.4
Ca_18892_v3 Cicer arietinum L. HOM05D004563 ORTHO05D002944 7.0e-08 62.4 180 27.8
TWI38G0108 Tripterygium wilfordii HOM05D032972 ORTHO05D037803 7.0e-08 62.4 166 30.7
Eucgr.A01904 Eucalyptus grandis HOM05D004563 ORTHO05D002944 9.1e-08 62.0 77 39.0
AT2G31130 Arabidopsis thaliana HOM05D004563 ORTHO05D002944 1.2e-07 61.6 57 42.1
Gohir.A10G031400 Gossypium hirsutum HOM05D004563 ORTHO05D002944 1.2e-07 61.6 163 27.6
Cc02_g14720 Coffea canephora HOM05D014572 ORTHO05D016880 1.6e-07 61.2 157 31.2
COL.COLO4_17605 Corchorus olitorius HOM05D008023 ORTHO05D002944 1.6e-07 61.2 214 23.8
Ciclev10015391m.g Citrus clementina HOM05D004563 ORTHO05D002944 2.0e-07 60.8 77 35.1
Gohir.D10G032200 Gossypium hirsutum HOM05D004563 ORTHO05D002944 2.7e-07 60.5 161 26.1
HanXRQChr17g0557991 Helianthus annuus HOM05D004563 ORTHO05D002944 2.7e-07 60.5 169 26.0
Lsat_1_v5_gn_8_140081 Lactuca sativa HOM05D004563 ORTHO05D002944 2.7e-07 60.5 66 39.4
Lj3g0000357 Lotus japonicus HOM05D004563 ORTHO05D002944 2.7e-07 60.5 193 25.9
Peaxi162Scf00261g01114 Petunia axillaris HOM05D014572 ORTHO05D016880 2.7e-07 60.5 146 29.5
Nitab4.5_0003322g0040 Nicotiana tabacum HOM05D014572 ORTHO05D016880 3.5e-07 60.1 213 25.8
TWI59G1400 Tripterygium wilfordii HOM05D004563 ORTHO05D002944 3.5e-07 60.1 91 30.8
Actinidia10974 Actinidia chinensis HOM05D004563 ORTHO05D002944 4.5e-07 59.7 176 30.7
CiPaw.04G131700 Carya illinoinensis HOM05D004563 ORTHO05D002944 4.5e-07 59.7 186 25.8
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 4.5e-07 59.7 87 36.8
PSO675G1487 Papaver somniferum HOM05D004563 ORTHO05D002944 4.5e-07 59.7 79 36.7
Peaxi162Scf00469g00139 Petunia axillaris HOM05D004563 ORTHO05D002944 4.5e-07 59.7 69 36.2
Solyc07g053320.4 Solanum lycopersicum HOM05D004563 ORTHO05D002944 5.9e-07 59.3 69 37.7
GSVIVG01020684001 Vitis vinifera HOM05D004563 ORTHO05D002944 5.9e-07 59.3 270 25.2
CARHR124710 Cardamine hirsuta HOM05D004563 ORTHO05D002944 7.7e-07 58.9 65 40.0
Dinv03911 Davidia involucrata HOM05D004563 ORTHO05D002944 7.7e-07 58.9 121 29.8
Dinv14971 Davidia involucrata HOM05D000845 ORTHO05D003813 7.7e-07 58.9 114 32.5
Gorai.011G033900 Gossypium raimondii HOM05D004563 ORTHO05D002944 7.7e-07 58.9 161 25.5
Nitab4.5_0009762g0030 Nicotiana tabacum HOM05D014572 ORTHO05D016880 7.7e-07 58.9 176 26.1
Phvul.005G096100 Phaseolus vulgaris HOM05D004563 ORTHO05D002944 7.7e-07 58.9 71 39.4
PGSC0003DMG400020429 Solanum tuberosum HOM05D004563 ORTHO05D002944 7.7e-07 58.9 69 37.7
vmacro12368 Vaccinium macrocarpon HOM05D004563 ORTHO05D002944 7.7e-07 58.9 259 23.9
Actinidia11133 Actinidia chinensis HOM05D004563 ORTHO05D002944 1.0e-06 58.5 291 23.7
AL4G26310 Arabidopsis lyrata HOM05D004563 ORTHO05D002944 1.0e-06 58.5 57 40.4
arahy.Tifrunner.gnm1.ann1.B2LHN7 Arachis hypogaea HOM05D004563 ORTHO05D002944 1.0e-06 58.5 66 43.9
Prupe.3G122900 Prunus persica HOM05D004563 ORTHO05D002944 1.0e-06 58.5 253 23.7
Prupe.4G170200 Prunus persica HOM05D008023 ORTHO05D002944 1.0e-06 58.5 54 44.4
Solyc12g010830.2 Solanum lycopersicum HOM05D004563 ORTHO05D002944 1.0e-06 58.5 67 38.8
Sopen12g006190 Solanum pennellii HOM05D004563 ORTHO05D002944 1.0e-06 58.5 67 38.8
PGSC0003DMG400007808 Solanum tuberosum HOM05D004563 ORTHO05D002944 1.0e-06 58.5 67 38.8
CiPaw.11G162800 Carya illinoinensis HOM05D008023 ORTHO05D002944 1.3e-06 58.2 262 24.8
Lalb_Chr03g0029881 Lupinus albus HOM05D004563 ORTHO05D002944 1.3e-06 58.2 283 23.0
Psat7g166160 Pisum sativum HOM05D004563 ORTHO05D002944 1.3e-06 58.2 57 43.9
Sopen07g027280 Solanum pennellii HOM05D004563 ORTHO05D002944 1.3e-06 58.2 69 36.2
Thecc.07G105200 Theobroma cacao HOM05D008023 ORTHO05D002944 1.3e-06 58.2 135 31.9
arahy.Tifrunner.gnm1.ann1.47XKI7 Arachis hypogaea HOM05D004563 ORTHO05D002944 1.7e-06 57.8 62 43.5
PSO541G0319 Papaver somniferum HOM05D004563 ORTHO05D002944 1.7e-06 57.8 79 35.4
TPR.G30391 Trifolium pratense HOM05D004563 ORTHO05D002944 1.7e-06 57.8 57 43.9
Atru.chr10.1682 Acer truncatum HOM05D023908 ORTHO05D002944 2.3e-06 57.4 162 28.4
BraA04t17911Z Brassica rapa HOM05D004563 ORTHO05D002944 2.3e-06 57.4 56 41.1
Glyma.06G231200 Glycine max HOM05D008023 ORTHO05D002944 2.3e-06 57.4 247 25.5
Nitab4.5_0003827g0050 Nicotiana tabacum HOM05D004563 ORTHO05D002944 2.3e-06 57.4 69 36.2
Rhsim04G0024700 Rhododendron simsii HOM05D008023 ORTHO05D002944 2.9e-06 57.0 134 28.4
Rhsim06G0133100 Rhododendron simsii HOM05D004563 ORTHO05D002944 2.9e-06 57.0 212 24.1
Sp4g13600 Schrenkiella parvula HOM05D004563 ORTHO05D002944 2.9e-06 57.0 55 40.0
Migut.M01048 Erythranthe guttata HOM05D014353 ORTHO05D002944 3.8e-06 56.6 89 36.0
Nitab4.5_0010797g0050 Nicotiana tabacum HOM05D004563 ORTHO05D002944 3.8e-06 56.6 69 36.2
Ca_23071_v3 Cicer arietinum L. HOM05D008023 ORTHO05D002944 5.0e-06 56.2 99 35.4
ClCG02G017950 Citrullus lanatus HOM05D004563 ORTHO05D002944 5.0e-06 56.2 281 22.1
CiPaw.12G114700 Carya illinoinensis HOM05D008023 ORTHO05D002944 6.5e-06 55.8 239 27.6
PGR042G0272 Punica granatum HOM05D004563 ORTHO05D002944 6.5e-06 55.8 84 31.0
BcaB02g10364 Brassica carinata HOM05D004563 ORTHO05D002944 8.6e-06 55.5 57 42.1
CsaV3_4G033230 Cucumis sativus L. HOM05D008023 ORTHO05D010897 8.6e-06 55.5 167 26.9
Duzib170G0431 Durio zibethinus HOM05D008023 ORTHO05D002944 8.6e-06 55.5 163 24.5
MD17G1232800 Malus domestica HOM05D004563 ORTHO05D002944 8.6e-06 55.5 302 21.5
Phvul.011G159200 Phaseolus vulgaris HOM05D008023 ORTHO05D002944 8.6e-06 55.5 134 27.6
QL08p041398 Quercus lobata HOM05D004563 ORTHO05D002944 8.6e-06 55.5 90 31.1
RcHm_v2.0_Chr5g0031461 Rosa chinensis HOM05D008023 ORTHO05D002944 8.6e-06 55.5 161 26.1


User provided reference genes

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