Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022493 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 3.7e-61 238.0 121 100.0
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 5.6e-17 91.3 70 71.4
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 8.6e-10 67.4 70 54.3
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 2.5e-09 65.9 71 54.9
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.5e-09 65.9 80 50.0
DCAR_008290 Daucus carota HOM05D007785 ORTHO05D008997 7.3e-09 64.3 72 50.0
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.2e-08 63.5 76 48.7
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 1.6e-08 63.2 76 50.0
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 2.1e-08 62.8 71 54.9
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 2.8e-08 62.4 72 54.2
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 2.8e-08 62.4 59 64.4
Hund11261 Selenicereus undatus HOM05D018059 ORTHO05D008997 2.8e-08 62.4 73 53.4
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.8e-08 62.4 71 52.1
Medtr4g098710 Medicago truncatula HOM05D007785 ORTHO05D008997 1.1e-07 60.5 71 49.3
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.4e-07 60.1 59 61.0
Gorai.004G187600 Gossypium raimondii HOM05D012518 ORTHO05D008997 1.4e-07 60.1 59 61.0
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 2.3e-07 59.3 72 50.0
Phvul.002G005800 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 2.3e-07 59.3 70 47.1
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 3.1e-07 58.9 74 48.6
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 5.2e-07 58.2 78 46.2
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 5.2e-07 58.2 71 47.9
AUR62041587 Chenopodium quinoa HOM05D018059 ORTHO05D008997 6.8e-07 57.8 78 47.4
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 8.9e-07 57.4 75 44.0
AUR62033093 Chenopodium quinoa HOM05D018059 ORTHO05D008997 1.5e-06 56.6 78 46.2
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 2.0e-06 56.2 74 47.3
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 2.6e-06 55.8 70 48.6
Glyma.17G153500 Glycine max HOM05D007785 ORTHO05D008997 3.4e-06 55.5 70 44.3
Psat4g078560 Pisum sativum HOM05D007785 ORTHO05D008997 3.4e-06 55.5 71 49.3
Ca_22059_v3 Cicer arietinum L. HOM05D007785 ORTHO05D008997 5.8e-06 54.7 71 43.7
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 9.9e-06 53.9 71 50.7


User provided reference genes

Program Settings