Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022464 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D008213 3.4e-112 408.3 202 100.0
CSS0030396 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D008213 3.2e-110 401.7 202 98.5
Dinv15310 Davidia involucrata HOM05D000041 ORTHO05D008213 2.3e-63 246.1 215 61.4
Hma1.2p1_0867F.1_g230270 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 1.7e-55 219.9 217 54.8
Actinidia13516 Actinidia chinensis HOM05D000041 ORTHO05D008213 6.2e-53 211.5 216 55.1
Rhsim12G0121300 Rhododendron simsii HOM05D000041 ORTHO05D008213 2.6e-51 206.1 208 53.8
Dinv35049 Davidia involucrata HOM05D000041 ORTHO05D008213 7.3e-46 188.0 187 52.9
vmacro16260 Vaccinium macrocarpon HOM05D000427 ORTHO05D008213 7.3e-46 188.0 217 49.3
Oeu001741.1 Olea europaea HOM05D000041 ORTHO05D008213 8.9e-44 181.0 213 48.4
Lj3C1051T12 Lonicera japonica HOM05D000041 ORTHO05D008213 3.4e-43 179.1 215 46.5
TAR629G3487 Trochodendron aralioides HOM05D000041 ORTHO05D008213 2.9e-42 176.0 215 45.1
CiPaw.05G150100 Carya illinoinensis HOM05D000041 ORTHO05D008213 1.1e-41 174.1 210 43.3
MD13G1090700 Malus domestica HOM05D000041 ORTHO05D008213 9.3e-41 171.0 189 48.7
Prupe.1G254900 Prunus persica HOM05D000041 ORTHO05D008213 9.3e-41 171.0 184 50.0
MD13G1091000 Malus domestica HOM05D000041 ORTHO05D008213 2.7e-40 169.5 186 49.5
RcHm_v2.0_Chr4g0443971 Rosa chinensis HOM05D000041 ORTHO05D008213 3.5e-40 169.1 219 46.6
Thecc.02G244000 Theobroma cacao HOM05D000041 ORTHO05D008213 1.7e-39 166.8 216 43.1
Aqoxy3G00996 Aquilegia oxysepala HOM05D000041 ORTHO05D008213 6.6e-39 164.9 215 42.3
FAN17G1009 Fragaria x ananassa HOM05D000041 ORTHO05D008213 1.5e-38 163.7 219 43.4
Nitab4.5_0000113g0200 Nicotiana tabacum HOM05D000041 ORTHO05D008213 5.6e-38 161.8 186 45.7
Hma1.2p1_0967F.1_g242270 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 7.3e-38 161.4 215 44.2
FAN12G3476 Fragaria x ananassa HOM05D000041 ORTHO05D008213 1.3e-37 160.6 198 46.0
Duzib251G0332 Durio zibethinus HOM05D000041 ORTHO05D008213 1.6e-37 160.2 218 39.9
Hma1.2p1_0802F.1_g220530 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 1.6e-37 160.2 215 43.7
MBI15_g31114_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D008213 2.8e-37 159.5 186 44.6
FAN22G0375 Fragaria x ananassa HOM05D000041 ORTHO05D008213 4.8e-37 158.7 219 43.4
Eucgr.H02614 Eucalyptus grandis HOM05D000041 ORTHO05D008213 6.2e-37 158.3 199 46.2
FvH4_4g34600 Fragaria vesca HOM05D000041 ORTHO05D008213 6.2e-37 158.3 209 43.5
Thecc.04G007600 Theobroma cacao HOM05D000041 ORTHO05D008213 8.1e-37 157.9 215 42.3
Peaxi162Scf00338g00013 Petunia axillaris HOM05D000041 ORTHO05D008213 1.1e-36 157.5 215 40.0
Manes.12G029800 Manihot esculenta HOM05D000041 ORTHO05D008213 2.4e-36 156.4 216 42.6
Sopen05g001660 Solanum pennellii HOM05D000041 ORTHO05D008213 3.1e-36 156.0 207 39.6
Gohir.A03G140400 Gossypium hirsutum HOM05D000041 ORTHO05D008213 5.3e-36 155.2 211 40.3
Solyc05g005660.1 Solanum lycopersicum HOM05D000041 ORTHO05D008213 5.3e-36 155.2 207 39.6
PGSC0003DMG400004108 Solanum tuberosum HOM05D000041 ORTHO05D008213 5.3e-36 155.2 186 40.9
PGSC0003DMG400030988 Solanum tuberosum HOM05D000041 ORTHO05D008213 5.3e-36 155.2 187 41.2
Haze_12168 Corylus avellana HOM05D000041 ORTHO05D008213 6.9e-36 154.8 234 40.6
FAN07G0244 Fragaria x ananassa HOM05D000041 ORTHO05D008213 6.9e-36 154.8 184 46.2
PGR119G0660 Punica granatum HOM05D000041 ORTHO05D008213 1.2e-35 154.1 235 38.3
QL03p061546 Quercus lobata HOM05D000041 ORTHO05D008213 1.2e-35 154.1 184 45.7
Nitab4.5_0002579g0050 Nicotiana tabacum HOM05D000041 ORTHO05D008213 1.5e-35 153.7 215 40.0
Cc11_g14580 Coffea canephora HOM05D000041 ORTHO05D008213 3.4e-35 152.5 222 41.0
CANSAT01G1335 Cannabis sativa HOM05D000427 ORTHO05D008213 5.8e-35 151.8 214 40.2
GSVIVG01032499001 Vitis vinifera HOM05D000041 ORTHO05D008213 7.6e-35 151.4 223 39.0
Actinidia15039 Actinidia chinensis HOM05D000041 ORTHO05D008213 2.2e-34 149.8 216 44.9
QL02p076968 Quercus lobata HOM05D000427 ORTHO05D008213 4.9e-34 148.7 218 39.0
PSO017G2181 Papaver somniferum HOM05D000041 ORTHO05D008213 6.4e-34 148.3 220 37.7
DCAR_024142 Daucus carota HOM05D000054 ORTHO05D008213 1.9e-33 146.7 218 38.5
Nitab4.5_0003454g0020 Nicotiana tabacum HOM05D000041 ORTHO05D008213 1.9e-33 146.7 217 40.6
Actinidia16928 Actinidia chinensis HOM05D000427 ORTHO05D008213 7.1e-33 144.8 205 40.5
DCAR_011214 Daucus carota HOM05D000041 ORTHO05D008213 1.6e-32 143.7 181 43.6
Phvul.003G052300 Phaseolus vulgaris HOM05D000041 ORTHO05D008213 2.1e-32 143.3 200 43.5
Glyma.18G137600 Glycine max HOM05D000041 ORTHO05D008213 3.5e-32 142.5 202 42.6
TWI75G0105 Tripterygium wilfordii HOM05D000041 ORTHO05D008213 3.5e-32 142.5 221 38.5
Glyma.19G010700 Glycine max HOM05D000041 ORTHO05D008213 7.8e-32 141.4 214 36.9
TWI36G0142 Tripterygium wilfordii HOM05D000041 ORTHO05D008213 1.0e-31 141.0 210 38.6
SalBow2G0112 Salvia bowleyana HOM05D000427 ORTHO05D008213 1.3e-31 140.6 211 39.3
VMungo0251G3655 Vigna mungo HOM05D000041 ORTHO05D008213 1.7e-31 140.2 202 41.6
COL.COLO4_04780 Corchorus olitorius HOM05D000041 ORTHO05D008213 5.1e-31 138.7 207 40.6
HanXRQChr08g0208831 Helianthus annuus HOM05D000041 ORTHO05D008213 6.6e-31 138.3 219 35.6
Prupe.3G282300 Prunus persica HOM05D000041 ORTHO05D008213 6.6e-31 138.3 189 40.7
CAN.G680.25 Capsicum annuum HOM05D000041 ORTHO05D008213 1.6e-29 133.7 185 38.9
Cpa.g.sc140.42 Carica papaya HOM05D000041 ORTHO05D008213 2.1e-29 133.3 199 40.2
ECA233G2133 Erigeron canadensis HOM05D000041 ORTHO05D008213 4.8e-29 132.1 219 37.0
Ciclev10018188m.g Citrus clementina HOM05D000427 ORTHO05D008213 8.1e-29 131.3 218 36.2
Gohir.D02G163100 Gossypium hirsutum HOM05D000041 ORTHO05D008213 1.1e-28 131.0 155 41.3
Gorai.005G183100 Gossypium raimondii HOM05D000041 ORTHO05D008213 1.1e-28 131.0 155 41.3
DCAR_015038 Daucus carota HOM05D000041 ORTHO05D008213 1.4e-28 130.6 211 36.5
Gohir.A09G025800 Gossypium hirsutum HOM05D000427 ORTHO05D008213 2.4e-28 129.8 205 38.0
arahy.Tifrunner.gnm1.ann1.HSMU8H Arachis hypogaea HOM05D000041 ORTHO05D008213 4.0e-28 129.0 196 38.8
arahy.Tifrunner.gnm1.ann1.I2ULHV Arachis hypogaea HOM05D000041 ORTHO05D008213 4.0e-28 129.0 196 38.8
Gohir.D09G025100 Gossypium hirsutum HOM05D000427 ORTHO05D008213 1.5e-27 127.1 206 36.9
Peaxi162Scf00129g01041 Petunia axillaris HOM05D000427 ORTHO05D008213 2.0e-27 126.7 213 35.2
Gorai.006G029200 Gossypium raimondii HOM05D000427 ORTHO05D008213 3.4e-27 125.9 205 37.6
FAN25G2233 Fragaria x ananassa HOM05D000041 ORTHO05D008213 3.8e-26 122.5 188 38.8
FAN11G1506 Fragaria x ananassa HOM05D000041 ORTHO05D008213 1.1e-25 120.9 229 35.4
FvH4_3g27000 Fragaria vesca HOM05D000041 ORTHO05D008213 1.4e-25 120.6 229 34.9
FAN21G3251 Fragaria x ananassa HOM05D000041 ORTHO05D008213 2.4e-25 119.8 229 34.9
Lsat_1_v5_gn_8_159800 Lactuca sativa HOM05D000041 ORTHO05D008213 5.4e-25 118.6 220 35.9
FAN16G3398 Fragaria x ananassa HOM05D000106 ORTHO05D008213 9.3e-25 117.9 235 34.0
Cpa.g.sc69.17 Carica papaya HOM05D000041 ORTHO05D008213 1.6e-24 117.1 141 43.3
CAN.G206.38 Capsicum annuum HOM05D000427 ORTHO05D008213 6.0e-24 115.2 181 36.5
PGSC0003DMG400000500 Solanum tuberosum HOM05D000041 ORTHO05D008213 6.0e-24 115.2 180 35.6
Manes.17G122900 Manihot esculenta HOM05D000041 ORTHO05D008213 1.0e-23 114.4 139 43.2
MD09G1035700 Malus domestica HOM05D000041 ORTHO05D008213 2.3e-23 113.2 145 42.1
Glyma.08G287866 Glycine max HOM05D000041 ORTHO05D008213 3.9e-23 112.5 134 43.3
ATR0691G246 Amborella trichopoda HOM05D000041 ORTHO05D008213 1.5e-22 110.5 212 33.5
Lsat_1_v5_gn_0_26320 Lactuca sativa HOM05D000041 ORTHO05D008213 1.5e-22 110.5 187 36.4
Solyc02g086960.2 Solanum lycopersicum HOM05D000517 ORTHO05D008213 6.2e-21 105.1 187 32.1
ECA246G3360 Erigeron canadensis HOM05D000041 ORTHO05D008213 1.4e-20 104.0 217 32.3
CAN.G184.44 Capsicum annuum HOM05D000041 ORTHO05D008213 3.1e-20 102.8 159 34.6
Migut.H00136 Erythranthe guttata HOM05D000041 ORTHO05D008213 7.6e-19 98.2 169 36.7
TAR622G1092 Trochodendron aralioides HOM05D000041 ORTHO05D008213 2.2e-18 96.7 116 47.4
RcHm_v2.0_Chr2g0170941 Rosa chinensis HOM05D000041 ORTHO05D008213 3.8e-18 95.9 115 40.9
Cfa009135 Carpinus fangiana HOM05D000041 ORTHO05D008213 3.2e-17 92.8 222 33.8
CAN.G184.42 Capsicum annuum HOM05D000041 ORTHO05D008213 1.0e-15 87.8 187 28.9
Duzib268G1618 Durio zibethinus HOM05D000041 ORTHO05D008213 1.1e-14 84.3 159 36.5
Migut.L01405 Erythranthe guttata HOM05D000041 ORTHO05D008213 7.4e-14 81.6 149 37.6
Nitab4.5_0001952g0020 Nicotiana tabacum HOM05D000106 ORTHO05D001065 5.5e-09 65.5 85 36.5
SEGI_11793 Sequoiadendron giganteum HOM05D000041 ORTHO05D008213 7.1e-09 65.1 195 24.1
MBI11_g07401_MAGBIO Magnolia biondii HOM05D000166 ORTHO05D009859 7.9e-08 61.6 113 28.3
QL02p093070 Quercus lobata HOM05D000085 ORTHO05D013998 1.5e-06 57.4 114 28.9
MBI15_g07762_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D013998 3.3e-06 56.2 104 27.9


User provided reference genes

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