Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022451 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D109420 1.2e-55 219.5 105 100.0
CSS0004850 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110813 5.0e-46 187.6 105 83.8
CSS0004673 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110129 3.9e-43 177.9 108 81.5
CSS0009725 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D112881 2.5e-42 175.3 112 77.7
CSS0012379 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D109788 2.7e-36 155.2 105 72.4
CSS0049972 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110748 2.3e-35 152.1 105 72.4
CSS0002883 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D113081 4.4e-34 147.9 105 71.4
CSS0006669 Camellia sinensis var. sinensis HOM05D016297 ORTHO05D110459 2.2e-17 92.4 105 47.6
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 3.2e-13 78.6 159 35.8
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 7.2e-13 77.4 159 35.2
CSS0002408 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113319 6.3e-09 64.3 46 67.4
CSS0008263 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D109032 6.3e-09 64.3 46 67.4
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.4e-08 63.2 104 40.4
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 9.2e-08 60.5 159 30.8
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.0e-07 59.3 159 30.2
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 2.0e-07 59.3 159 29.6
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 5.9e-07 57.8 159 29.6
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 7.7e-07 57.4 158 30.4
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 1.7e-06 56.2 158 29.7
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 1.7e-06 56.2 159 30.8
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 2.3e-06 55.8 159 28.9
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 2.9e-06 55.5 160 28.8
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 5.0e-06 54.7 42 69.0
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 5.0e-06 54.7 42 66.7
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 5.0e-06 54.7 159 29.6
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 5.0e-06 54.7 42 69.0
CSS0019155 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D113160 6.6e-06 54.3 46 58.7
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 6.6e-06 54.3 42 64.3
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 6.6e-06 54.3 42 64.3
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 6.6e-06 54.3 42 64.3
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 6.6e-06 54.3 146 29.5
CSS0013425 Camellia sinensis var. sinensis HOM05D020919 ORTHO05D112516 8.6e-06 53.9 46 56.5
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 8.6e-06 53.9 50 58.0
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 8.6e-06 53.9 50 58.0


User provided reference genes

Program Settings