Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022418 Camellia sinensis var. sinensis HOM05D007996 ORTHO05D009821 6.6e-44 180.6 114 100.0
Atru.chr9.1020 Acer truncatum HOM05D007996 ORTHO05D009821 2.9e-15 85.5 68 66.2
vmacro19229 Vaccinium macrocarpon HOM05D007996 ORTHO05D009821 1.1e-14 83.6 73 72.6
CiPaw.12G036300 Carya illinoinensis HOM05D007996 ORTHO05D009821 1.2e-13 80.1 68 64.7
Thecc.03G124100 Theobroma cacao HOM05D007996 ORTHO05D009821 3.9e-12 75.1 73 61.6
Aqoxy5G03550 Aquilegia oxysepala HOM05D007996 ORTHO05D009821 5.1e-12 74.7 67 61.2
Duzib084G1431 Durio zibethinus HOM05D007996 ORTHO05D009821 5.1e-12 74.7 76 63.2
QL10p004811 Quercus lobata HOM05D007996 ORTHO05D009821 8.7e-12 73.9 68 60.3
Potri.012G094000 Populus trichocarpa HOM05D007996 ORTHO05D009821 2.5e-11 72.4 70 61.4
Gohir.A12G188200 Gossypium hirsutum HOM05D007996 ORTHO05D009821 3.3e-11 72.0 79 55.7
Gohir.D12G191000 Gossypium hirsutum HOM05D007996 ORTHO05D009821 3.3e-11 72.0 79 55.7
Gorai.008G204900 Gossypium raimondii HOM05D007996 ORTHO05D009821 3.3e-11 72.0 79 55.7
Hma1.2p1_0014F.1_g009860 Hydrangea macrophylla HOM05D007996 ORTHO05D009821 9.6e-11 70.5 43 79.1
Haze_07260 Corylus avellana HOM05D007996 ORTHO05D009821 2.1e-10 69.3 68 60.3
Glyma.05G045400 Glycine max HOM05D007996 ORTHO05D009821 2.1e-10 69.3 68 57.4
Manes.14G054700 Manihot esculenta HOM05D007996 ORTHO05D009821 2.1e-10 69.3 67 58.2
Potri.015G091300 Populus trichocarpa HOM05D007996 ORTHO05D009821 2.1e-10 69.3 44 75.0
Glyma.17G127600 Glycine max HOM05D007996 ORTHO05D009821 3.6e-10 68.6 68 58.8
Rhsim08G0186300 Rhododendron simsii HOM05D007996 ORTHO05D009821 4.8e-10 68.2 37 89.2
AUR62001291 Chenopodium quinoa HOM05D007996 ORTHO05D009821 6.2e-10 67.8 66 54.5
TWI14G0037 Tripterygium wilfordii HOM05D007996 ORTHO05D009821 8.1e-10 67.4 56 62.5
TWI39G0948 Tripterygium wilfordii HOM05D000063 ORTHO05D008721 1.1e-09 67.0 54 66.7
Actinidia25607 Actinidia chinensis HOM05D007996 ORTHO05D009821 1.4e-09 66.6 66 60.6
CiPaw.11G011200 Carya illinoinensis HOM05D007996 ORTHO05D009821 1.4e-09 66.6 68 57.4
Lalb_Chr07g0183251 Lupinus albus HOM05D007996 ORTHO05D009821 1.4e-09 66.6 39 82.1
EL10Ac7g18091 Beta vulgaris HOM05D007996 ORTHO05D009821 1.8e-09 66.2 72 51.4
Phvul.003G208700 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 1.8e-09 66.2 68 55.9
Manes.06G116300 Manihot esculenta HOM05D007996 ORTHO05D009821 5.3e-09 64.7 46 67.4
MBI06_g40149_MAGBIO Magnolia biondii HOM05D007996 ORTHO05D009821 9.0e-09 63.9 69 59.4
SalBow5G2505 Salvia bowleyana HOM05D007996 ORTHO05D009821 9.0e-09 63.9 71 49.3
Lj4g0006448 Lotus japonicus HOM05D007996 ORTHO05D009821 1.2e-08 63.5 68 54.4
Lalb_Chr08g0236981 Lupinus albus HOM05D007996 ORTHO05D009821 1.2e-08 63.5 68 55.9
Solyc06g071930.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 1.2e-08 63.5 69 52.2
Sopen06g028210 Solanum pennellii HOM05D007996 ORTHO05D009821 1.2e-08 63.5 69 52.2
PGSC0003DMG400027111 Solanum tuberosum HOM05D007996 ORTHO05D009821 1.2e-08 63.5 69 52.2
Actinidia16189 Actinidia chinensis HOM05D007996 ORTHO05D009821 1.5e-08 63.2 37 83.8
CAN.G1046.7 Capsicum annuum HOM05D007996 ORTHO05D009821 1.5e-08 63.2 69 52.2
Cpa.g.sc4.79 Carica papaya HOM05D007996 ORTHO05D009821 1.5e-08 63.2 43 69.8
Nn4g22432 Nelumbo nucifera HOM05D007996 ORTHO05D009821 2.0e-08 62.8 66 56.1
SalBow5G3809 Salvia bowleyana HOM05D007996 ORTHO05D009821 2.0e-08 62.8 71 47.9
Psat4g063440 Pisum sativum HOM05D007996 ORTHO05D009821 3.4e-08 62.0 68 55.9
PGR044G0405 Punica granatum HOM05D007996 ORTHO05D009821 3.4e-08 62.0 70 54.3
Medtr4g103970 Medicago truncatula HOM05D007996 ORTHO05D009821 4.5e-08 61.6 68 54.4
Phvul.009G168600 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 4.5e-08 61.6 71 50.7
Oeu045473.1 Olea europaea HOM05D007996 ORTHO05D009821 1.7e-07 59.7 65 55.4
Solyc03g110990.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 2.2e-07 59.3 63 52.4
Glyma.04G193300 Glycine max HOM05D007996 ORTHO05D009821 2.9e-07 58.9 63 54.0
Prupe.5G156000 Prunus persica HOM05D007996 ORTHO05D009821 2.9e-07 58.9 41 65.9
ClCG03G003560 Citrullus lanatus HOM05D007996 ORTHO05D009821 3.8e-07 58.5 68 51.5
CsaV3_1G009400 Cucumis sativus L. HOM05D007996 ORTHO05D009821 3.8e-07 58.5 38 73.7
TPR.G40415 Trifolium pratense HOM05D007996 ORTHO05D009821 4.9e-07 58.2 68 51.5
MELO3C002341.2 Cucumis melo HOM05D007996 ORTHO05D009821 6.4e-07 57.8 38 73.7
Oeu037569.1 Olea europaea HOM05D007996 ORTHO05D009821 1.1e-06 57.0 65 53.8
THA.LOC109116227 Tarenaya hassleriana HOM05D007996 ORTHO05D009821 1.1e-06 57.0 67 49.3
MBI11_g42682_MAGBIO Magnolia biondii HOM05D007996 ORTHO05D009821 1.4e-06 56.6 51 56.9
Nn3g16560 Nelumbo nucifera HOM05D007996 ORTHO05D009821 1.4e-06 56.6 40 72.5
Sed0008862 Sechium edule HOM05D007996 ORTHO05D009821 1.4e-06 56.6 68 50.0
Sed0027846 Sechium edule HOM05D007996 ORTHO05D009821 1.4e-06 56.6 68 50.0
DCAR_007470 Daucus carota HOM05D007996 ORTHO05D009821 1.9e-06 56.2 78 48.7
AUR62025676 Chenopodium quinoa HOM05D007996 ORTHO05D009821 3.2e-06 55.5 66 50.0
Nitab4.5_0005327g0040 Nicotiana tabacum HOM05D007996 ORTHO05D009821 3.2e-06 55.5 63 54.0
TAR629G0997 Trochodendron aralioides HOM05D007996 ORTHO05D009821 3.2e-06 55.5 69 60.9
Cc04_g10190 Coffea canephora HOM05D007996 ORTHO05D009821 4.2e-06 55.1 40 67.5
unitig_22.g6269 Utricularia gibba HOM05D007996 ORTHO05D009821 4.2e-06 55.1 66 43.9
Lj1g0020512 Lotus japonicus HOM05D007996 ORTHO05D009821 9.3e-06 53.9 70 52.9


User provided reference genes

Program Settings