Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.8e-117 425.2 206 100.0
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.3e-86 321.6 212 72.6
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 4.8e-85 318.2 212 72.6
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.1e-81 307.0 212 71.7
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.7e-80 302.4 209 71.3
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.5e-35 152.1 144 45.8
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.9e-35 151.8 218 38.5
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.3e-34 150.6 144 45.8
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.5e-34 148.3 184 39.7
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.5e-34 148.3 184 39.7
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-33 147.1 184 39.7
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 4.2e-33 145.6 184 38.6
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.5e-33 145.2 184 39.1
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 7.2e-33 144.8 131 48.1
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.0e-31 141.0 144 43.8
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 4.9e-29 132.1 165 41.2
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.6e-24 115.9 141 37.6
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.3e-23 113.2 143 32.2
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.2e-23 112.1 112 42.9
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-22 110.5 154 35.7
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-22 110.2 154 35.7
CSS0018900 Camellia sinensis var. sinensis HOM05D047189 ORTHO05D001590 4.4e-22 109.0 119 47.9
CSS0038129 Camellia sinensis var. sinensis HOM05D047189 ORTHO05D001590 9.8e-22 107.8 119 47.9
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.2e-21 106.7 144 32.6
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 4.9e-21 105.5 131 33.6
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.4e-21 105.1 144 38.2
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.3e-21 104.8 154 34.4
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.3e-21 104.8 154 34.4
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-20 104.0 112 41.1
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.6e-19 99.0 168 32.1
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.8e-19 98.2 138 31.9
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.8e-19 98.2 130 33.1
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-18 97.8 101 42.6
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-18 97.8 101 42.6
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-18 97.8 101 42.6
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-18 97.8 101 42.6
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-18 97.8 101 42.6
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-18 97.8 101 42.6
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.0e-18 97.8 101 42.6
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-18 95.9 130 33.8
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 3.9e-18 95.9 147 33.3
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 5.0e-18 95.5 130 33.8
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.6e-18 95.1 127 31.5
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 8.6e-18 94.7 101 41.6
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.6e-18 94.7 130 33.8
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 8.6e-18 94.7 139 30.9
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.5e-17 93.2 133 33.1
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.5e-17 93.2 135 32.6
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 2.5e-17 93.2 92 42.4
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 2.5e-17 93.2 92 42.4
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.5e-17 93.2 137 31.4
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-17 92.4 135 32.6
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-17 92.0 129 32.6
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 5.6e-17 92.0 124 29.0
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.5e-17 91.3 135 35.6
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.5e-17 91.3 130 32.3
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-16 90.9 135 35.6
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-16 90.9 135 35.6
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-16 90.9 142 34.5
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.2e-16 90.9 135 35.6
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-16 90.1 99 41.4
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.1e-16 90.1 135 35.6
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.7e-16 89.0 130 31.5
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-16 88.6 138 27.5
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.0e-16 88.2 130 31.5
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.1e-15 87.8 144 34.0
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-15 87.8 138 27.5
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-15 87.4 130 31.5
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.3e-15 86.7 145 29.7
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-15 86.3 104 34.6
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.2e-15 85.5 145 32.4
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.8e-15 85.1 69 56.5
CSS0034224 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 8.9e-15 84.7 67 55.2
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 8.9e-15 84.7 163 32.5
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.9e-15 84.7 103 35.9
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.5e-14 84.0 145 29.0
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.5e-14 84.0 145 29.0
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 4.4e-14 82.4 145 29.0
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 5.8e-14 82.0 126 33.3
Rhsim01G0025600 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.8e-14 82.0 163 28.2
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.3e-13 80.9 97 37.1
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.2e-13 80.1 128 24.2
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-12 77.8 95 33.7
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.9e-12 77.0 139 28.1
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.4e-12 76.6 113 31.9
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.4e-12 76.6 113 31.9
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.4e-12 76.6 113 31.9
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.4e-12 75.5 130 27.7
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.0e-12 75.1 212 24.5
FAN05G1235 Fragaria x ananassa HOM05D011367 ORTHO05D001590 9.2e-12 74.7 103 34.0
PSO675G7395 Papaver somniferum HOM05D008588 ORTHO05D010137 9.2e-12 74.7 128 32.0
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 9.2e-12 74.7 106 31.1
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 1.6e-11 73.9 142 28.2
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-11 73.9 138 26.1
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.6e-11 73.9 105 31.4
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-11 73.2 95 33.7
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 3.5e-11 72.8 113 28.3
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 4.6e-11 72.4 153 27.5
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 4.6e-11 72.4 146 28.1
PSO210G2316 Papaver somniferum HOM05D008588 ORTHO05D010137 6.0e-11 72.0 122 32.8
PSO541G0958 Papaver somniferum HOM05D008588 ORTHO05D010137 6.0e-11 72.0 122 32.8
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-11 72.0 144 24.3
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-11 72.0 167 23.4
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-11 72.0 167 23.4
Actinidia12982 Actinidia chinensis HOM05D007376 ORTHO05D001590 7.8e-11 71.6 76 38.2
PSO063G6468 Papaver somniferum HOM05D008588 ORTHO05D010137 1.0e-10 71.2 122 32.0
Rhsim07G0128100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-10 70.5 106 31.1
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.0e-10 69.7 112 33.0
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 5.0e-10 68.9 104 29.8
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 8.6e-10 68.2 182 23.6
FvH4_4g08592 Fragaria vesca HOM05D001313 ORTHO05D001590 1.1e-09 67.8 129 29.5
FvH4_2g03221 Fragaria vesca HOM05D001313 ORTHO05D001590 2.5e-09 66.6 129 29.5
FvH4_4g17740 Fragaria vesca HOM05D001313 ORTHO05D001590 2.5e-09 66.6 129 28.7
FAN12G2584 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.5e-09 66.6 128 28.9
FvH4_3g31130 Fragaria vesca HOM05D001313 ORTHO05D001590 3.3e-09 66.2 126 29.4
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 3.3e-09 66.2 137 19.7
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.3e-09 65.9 181 24.9
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 4.3e-09 65.9 72 44.4
FvH4_6g20370 Fragaria vesca HOM05D001313 ORTHO05D001590 1.2e-08 64.3 129 27.1
FAN06G4349 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.2e-08 64.3 131 28.2
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 1.2e-08 64.3 132 22.7
FvH4_3g30870 Fragaria vesca HOM05D001313 ORTHO05D001590 1.6e-08 63.9 129 27.9
FvH4_2g01890 Fragaria vesca HOM05D001313 ORTHO05D001590 2.8e-08 63.2 129 27.9
FvH4_1g28820 Fragaria vesca HOM05D001313 ORTHO05D001590 3.6e-08 62.8 129 29.5
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 3.6e-08 62.8 104 29.8
FvH4_1g24741 Fragaria vesca HOM05D001313 ORTHO05D001590 4.7e-08 62.4 129 27.9
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.7e-08 62.4 141 24.8
Actinidia09092 Actinidia chinensis HOM05D026250 ORTHO05D026319 8.1e-08 61.6 85 29.4
FAN19G2770 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.1e-08 61.6 129 27.9
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-07 61.2 180 23.9
FvH4_3g31650 Fragaria vesca HOM05D001313 ORTHO05D001590 1.8e-07 60.5 111 27.0
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 1.8e-07 60.5 171 23.4
FvH4_5g37401 Fragaria vesca HOM05D001313 ORTHO05D001590 3.1e-07 59.7 129 26.4
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 8.9e-07 58.2 93 31.2
FAN19G2053 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.0e-06 57.0 131 29.0
FvH4_1g20524 Fragaria vesca HOM05D001313 ORTHO05D001590 2.6e-06 56.6 97 29.9
FvH4_5g37521 Fragaria vesca HOM05D001313 ORTHO05D001590 4.4e-06 55.8 107 29.0


User provided reference genes

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